| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1788 |
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| Symbol | |
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| ID | 7173704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2188081 |
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| End bp | 2189025 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643540303 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_002436200 |
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| Protein GI | 218886879 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.249086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGC GCATCCCCCT GCCCGCATGC GGTCCAACGT CCCGGCCCGG CATCCTGTGG
ACGTTGGCCG CCCTGCTGAT GGCGGCGCTT GTCCTGCTGG CCCCGACAAC ACTGGCCGCG
CTGTCAGCGC TGACCGGTCA CTTCCCGACC CTGGGGCCGG AAGATGGACT GACCCTGCGC
GACCGGCTGC TGGACCTGCA CGCCCGCCAC CCCGTGGTCA GTGTGGCCGC GTACATGGCG
GGCTATGTGC TGATGACCGC CTGCTCCATC CCCGGCGCGG TGTTCCTGAC CCTGACCGGC
GGGGCCGTGT TCGGCTTCGG CGTGGCCCTT GCCGCCGTCA GCGCGGCCAG CACCGCCGGG
GCCTGCCTGG CCTTCCTGAG CGCCCGCCAC CTGCTGCGGG CCACGGTGCG CCGCCTGTGG
CCCGGCCAAC TGGCCCGCAT CGACGCGGCC ATGGCGCAAG GGGGCGGCAG CCCCGGTGGG
CCGACGCAGG CAGGGACGCA GCCTCCTTCC CCCTTCCCGG ATTCTTCGGA TCATGCGTCG
GCAGTCCATG CGGCGGCAGG CCAGGCATCC CCTGCCCGGC CACCGTCCGG GGTGCCCGGC
TCCGGGTTGA TCTCGCCAGG CGCGCTGTGC CTGCTGGGCC TGCGCTGCGT GCCCGTGATG
CCCTACTGGC TGGTGAATCT GCTGTTCGGG GTCACCGCCA TGCGTCTTTC CACCTTCGCC
ACGGTCTCGC TGCTCGGCAT GGTGCCACTG AACGCCCTTT ACGTGCACGC CGGGGCGGAA
CTGGGACGCA TCCGCCACCT TGGCGACATC ATTTCCCTGC GCGCCGGGCT TGCCCTGTGC
CTGCTGGCCG TAGCCCCCCT GCTGCTGCGC CGGGTGGCGC GCACGCCGCA GGCTCGGCCA
TGCACCGGCA CCCACCCCGC GTCCGCCACG GACCCCCCCC GTTAG
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| Protein sequence | MTRRIPLPAC GPTSRPGILW TLAALLMAAL VLLAPTTLAA LSALTGHFPT LGPEDGLTLR
DRLLDLHARH PVVSVAAYMA GYVLMTACSI PGAVFLTLTG GAVFGFGVAL AAVSAASTAG
ACLAFLSARH LLRATVRRLW PGQLARIDAA MAQGGGSPGG PTQAGTQPPS PFPDSSDHAS
AVHAAAGQAS PARPPSGVPG SGLISPGALC LLGLRCVPVM PYWLVNLLFG VTAMRLSTFA
TVSLLGMVPL NALYVHAGAE LGRIRHLGDI ISLRAGLALC LLAVAPLLLR RVARTPQARP
CTGTHPASAT DPPR
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