| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1784 |
|---|
| Symbol | |
|---|
| ID | 7173700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2183779 |
|---|
| End bp | 2184876 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643540300 |
|---|
| Product | membrane-bound metal-dependent hydrolase |
|---|
| Protein accession | YP_002436197 |
|---|
| Protein GI | 218886876 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1988] Predicted membrane-bound metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 73 |
|---|
| Fosmid unclonability p-value | 0.461872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGG TAACCCATCT TGCCAGCGGC GCGCTTGTGG CCATGGCCCT GCCCGATACC
CGGCGCAGCC GCTGGTTCAT GCCCTTTGCC CTGACCTGCG CGGTGCTGCC CGACGTGGAT
GTGTTCTTCG GTTCCACGCC GCTGGACTAT CTGACACTGC ACCGGGGCAT CACCCATTCC
TTTGCGGGCG GGGCGGTCAT GGCCCTGCTG ACGGCGCTGC TGTTCCTGCC GCTGCTGCGG
CGCGCCCCGC GCGATTTCAT GGGGAGCGGC GGCGTGCACA CCTGGGGCTA TGCCCGCCAT
GCACTTGCCG CCTACGGGCT GATCCTGCTG CACATCTTTC TGGACTGCAT CACCACCTAC
GGCACGCAGG TGTTCCTGCC CTTTTCCGAC TACCGGGTGG CCCTGCCCGC CGTGTTCATC
ATCGACCCTG TCATGACGCT GGTGATGCTG GCGTGCATCG TGGCGGCCAT GGGCCGGGCG
CATCGGCGCA CCTTTGCCGC GCTGGGCCTG GCCTGGACCG TGCTGTGGCC CGGCGCTTCG
CTGGCGGTGC AGCAGCACGT GCAGTCCGGC CTGGTGGCGA AGCTGGCCGC GCAGCCCGTG
CCGCCCGTGT CGGTGGCGGT AATCCCCGAG GTGCTGGCCC CGTTCAACTG GAAGGTGGTG
GTGGATGATG GCCGCCGCTA CGGCATGGCC CGCTACCAGT TGCTGAACCC GGATGCGCCG
CTGGCCCTCG AACTGTTCGA AAAGGCGGAC CCGGTGCTGT ACCGCCGCCT GTCCGAGGGG
GAAGAACTGT TCCGCGTGTA TGGCCGCTTT GCCATGTTCA TGACTCAGGA GACCCGGCAG
GAAAACGGGG CGTCCGTGAT CGCCTATCGC GACCTGCGCT TTGCCTCCAC GGTGCCGTTC
ATGCGCATGC TGCGCGGCGA GGGCGTGCCC TTCCAGTTGT GGGCGCGCCT TTCCACCGAC
GGGCGGCTGG AAGGGTTCCG TTTCGTGCAG GGGCGCGCGG CTGGCGGCAG CGATGCGGCA
GGCGCGGCTG GCGGGACTGG CGGGACTGGC GGGACTGGCG GAACTGGCGG CGGCGACTGG
GTGCCCGTGG CGCGTTAA
|
|---|
| Protein sequence | MDPVTHLASG ALVAMALPDT RRSRWFMPFA LTCAVLPDVD VFFGSTPLDY LTLHRGITHS
FAGGAVMALL TALLFLPLLR RAPRDFMGSG GVHTWGYARH ALAAYGLILL HIFLDCITTY
GTQVFLPFSD YRVALPAVFI IDPVMTLVML ACIVAAMGRA HRRTFAALGL AWTVLWPGAS
LAVQQHVQSG LVAKLAAQPV PPVSVAVIPE VLAPFNWKVV VDDGRRYGMA RYQLLNPDAP
LALELFEKAD PVLYRRLSEG EELFRVYGRF AMFMTQETRQ ENGASVIAYR DLRFASTVPF
MRMLRGEGVP FQLWARLSTD GRLEGFRFVQ GRAAGGSDAA GAAGGTGGTG GTGGTGGGDW
VPVAR
|
|---|
| |