| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1713 |
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| Symbol | |
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| ID | 7173628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2092102 |
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| End bp | 2094720 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643540229 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002436127 |
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| Protein GI | 218886806 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA CCCAACGCCT CGGCCTTCGT GGCGAGCCCC TGTGGCTCAT GGACGGCTCG
GCCTTCATCT TCCGGGGCTT CTACGCCTAC CAGAGCATGC AGCGTTCGGA CGGGTTTCCC
ACCAACGCGC TGTTCATCGT CACCCGCATC CTGCTGCGCC TTCTGCGCGA GGAGCGCCCC
ACGAATTTCT GCTTCGTGCT GGACGGCAAG GGACCGACCT TCCGGCACGA GCTGTTCCCG
CCGTACAAGA TGCAGCGCGC GGTCACGCCG GAACCGCTGG TGCAGCAGTT GGACCCCATC
AAGCGCATGG TAAGGGCGCT TGGCCTCCCA TTGGTCGTGT CCGACGGGTG CGAGGCCGAC
GACTGCATCG CCTCGCTGGC GGCGCGCCAC CGCAGCGAAC GGCCCGTGGT CATCGTGGGC
ACGGACAAGG ACCTGAAGCA GTGCCTGCAC GACAACGTGG TGCTGTGGGA CCCGGCGGCC
AAGGAAGAAA AGCTGGTCAC CCTCGCGGAC TTCACGGCGG AAACGGGCCT TGCGCCCGCC
CGCTGGCCCG ACTTTCAGGC GGTCATCGGC GATTCGTCGG ACAACATCCC CGGCATCCCC
GGCGTTGGCC CCAAGACGGC GGAAAAGATA TTCAAGGACT TCGGCTCGCT GGAAGACATC
CGCGACCGCG TGGGCGAACT GCCCGAAAAG CTGCGCGCCA AGTTCGAGCC GCACCTTGAA
ACCATGTTCC TGTACCGCCA GCTGACCACC CTGACCACCG ACGCCTGCCC GGAAGTGACC
CTGCCCGACC TGGCAGTGCG CCCGCTGGAC CCGGCGGAGG CCGGTGCCAT GCTGCGCGAA
TTCGAGTTGC GTCAGCTTAC CCGCGAACTC TCCGGCATGA TAGAGAACGG CAGCGTCACC
TCTGCCCCGC GCTCCACCAG CCAGGTGCAG GCCAGCCTGT TCGGCGACGA GGGCCGCCGG
GCCGACCCGG TGAACACCTG CAAGGACCCC GGCAAGCTGC CCGACTGCGA AGGCGTGGCC
GCCGCCGTGG TGCCCGTGTT CGACAACGGC GCCATCACCG CCTACGCCGT AGCCGCCGGG
GATTGCGAAA GCCGCTACTC CGGGCCGGTG GACGCGCTGG CCCGCCACCT TTCCAGGGCC
GCGCAGGTGG CCGCGCCCGA CGTGAAGCAC CTCTTGCGCA CCGACCCGGC CTGGGCCGGC
ATCGACCCGG CCCGCTGGTT CGACCTGGGG CTTGCCGCCT ACCTGCTGAA CCCGGAAGAG
CGCGACTACG GCTGGCCGCG TCTGGCCGCC CGCTGGGGCG ACGAACTGGA ACGCTCGTCC
GGCAACCCCG GCCTGCTGGC GCTGGAAATG GCGGGCGCGC TGTCGGGACG TCTGGCCGGG
GCGCAGCTGT CGCGTCTGAT GCGCACGCTG GAAATGCCGC TGATCCCCGT GCTGGCCGAC
ATGGAGGCGG CGGGCATCGC CGTGGACCTG GACGCCTTTG CCGCCTTCCT GCGCGAGGTG
CAGGGCGAAC TCGACCGCCT GACGCGCGAC GTCTACAAGG CCGCCGGGGG CGAATTCAAC
ATCCGCTCCT CGCAGCAGCT GGCCGAATTG CTGTTCGGCA CGCTGGGCCT GCCCACGGGC
GGCAAGACCA AGGGCGGCCA GACATCCACC GCGCAGGACG TGCTGGAAAA GCTGTCCGGT
CGCCATCCGG TGGTGGACGC CATCCTGGAA TTCCGCAAGC TGGAGAAGCT GCGCTCCACC
TACCTGGAAC CGCTGCCCCG CCTCGTGGAC GGCGCCGGGC GCATCCACAC CACCTTCAAC
CAGCTGGCCA CGGCCACCGG GCGGCTGTCG TCCAGCAACC CGAACCTCCA GAACATTCCC
GTGCGGGGCG ACCTTGGCCG CCGCATGCGC ACCTGCTTCA CCGCCGCGCC GGGCCTGCGT
CTGGTGTCCG CCGACTATTC GCAGGTGGAA CTGCGCGTGC TGGCCCACAT GTCGCAAGAC
CCCACGCTGC TGGCCGCCTT CCGCGAGGGG GCGGACATCC ACAGCCGCAC TGCCAGTCTT
TTATACGACG TGGCGCAGGA TCAGGTTTCC ACCGACCAGC GCCGCAACGC CAAGACCATC
AACTTCGGGC TCATCTACGG CATGGGGCCG CAGAAGCTGG CGCAGGAACT GCGCATCCCG
CTCACCGAGG CCAAGGCGTT CATCGAACGG TATTTCAGCA AGTTGCAGAA GCTGCGCGAA
TTCTACGACG AGGCGGAAAC CACCGCCCGC GAACTGGGCT ACGTGACCAC CATGGCGGGC
CGCCGCCGCC TGCTGCCGGA AATCCATTCC GAAAACACCC AGCTGAAGTC GCAGGCGCGC
CGCCAGGCCA TCAACACCCT GATCCAAGGC AGCGCCGCCG ACATCATCAA GCTGGCCATG
CTGGCCGCCC ACGCCGACCC GGAACTGCGC GCCCTGAACG CCCGGCTCAT CCTGCAGGTG
CACGACGAAC TGCTGCTGGA AGTGCCCGCC GACAACGCCC CCGCCGCCGG CGAGCGCCTG
GCCGCGATCA TGTCCGGCGT GCGGCCCGGT GGGGTTGCAC TGGATGTCCC CCTTGCCGTC
GATTGGGGGC AGGGGGAGAA CTGGGGCGTT GCACATTGA
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| Protein sequence | MSLTQRLGLR GEPLWLMDGS AFIFRGFYAY QSMQRSDGFP TNALFIVTRI LLRLLREERP
TNFCFVLDGK GPTFRHELFP PYKMQRAVTP EPLVQQLDPI KRMVRALGLP LVVSDGCEAD
DCIASLAARH RSERPVVIVG TDKDLKQCLH DNVVLWDPAA KEEKLVTLAD FTAETGLAPA
RWPDFQAVIG DSSDNIPGIP GVGPKTAEKI FKDFGSLEDI RDRVGELPEK LRAKFEPHLE
TMFLYRQLTT LTTDACPEVT LPDLAVRPLD PAEAGAMLRE FELRQLTREL SGMIENGSVT
SAPRSTSQVQ ASLFGDEGRR ADPVNTCKDP GKLPDCEGVA AAVVPVFDNG AITAYAVAAG
DCESRYSGPV DALARHLSRA AQVAAPDVKH LLRTDPAWAG IDPARWFDLG LAAYLLNPEE
RDYGWPRLAA RWGDELERSS GNPGLLALEM AGALSGRLAG AQLSRLMRTL EMPLIPVLAD
MEAAGIAVDL DAFAAFLREV QGELDRLTRD VYKAAGGEFN IRSSQQLAEL LFGTLGLPTG
GKTKGGQTST AQDVLEKLSG RHPVVDAILE FRKLEKLRST YLEPLPRLVD GAGRIHTTFN
QLATATGRLS SSNPNLQNIP VRGDLGRRMR TCFTAAPGLR LVSADYSQVE LRVLAHMSQD
PTLLAAFREG ADIHSRTASL LYDVAQDQVS TDQRRNAKTI NFGLIYGMGP QKLAQELRIP
LTEAKAFIER YFSKLQKLRE FYDEAETTAR ELGYVTTMAG RRRLLPEIHS ENTQLKSQAR
RQAINTLIQG SAADIIKLAM LAAHADPELR ALNARLILQV HDELLLEVPA DNAPAAGERL
AAIMSGVRPG GVALDVPLAV DWGQGENWGV AH
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