Gene DvMF_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1317 
Symbol 
ID7173221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1609604 
End bp1610359 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID643539825 
ProductABC transporter related 
Protein accessionYP_002435734 
Protein GI218886413 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.00107487 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGTCG CCAAGGGGTT GCGCTACACC CATCCCGGCA CCCCGGCGGG AACAGGCCCT 
GCTCTGGACG GGGCGGAATT TTTCGTGCCG CCCGGCGCGC TGCTGTGCCT GTGCGGGGTC
AACGGCAGCG GCAAGTCCAC CCTGCTGCAA CTGCTGGCCG GGCTGCTGCG GGCGGAAGGC
GGCACGCTGG ACGTGGCCGG GCACCATTGC CCCGGCGCGG AAGCGGCGCT GCGCCGCCAT
GCCGCGCTGG TGTTGCAGGA TGCGGACATG CAGATGCTGG GGGCCACGGT GGCGGAAGAT
CTGCTGCTTA CCGCGCCGCC TGCCCACACC CCGCAAGGCG CGGCCGCCCT GGCCGCCGCG
CGCGAGGCGG CGGGCCGGTT CGGCCTTGCC GCGCACTGGG ACAGCCCCGT GCACACCCTG
TCCTACGGGC AGAAGCGCAA GCTGTGCCTG GCCGCCGCGC TGCTTGCCGC GCCGGGCCTG
CTGCTGCTGG ACGAGCCGTT CAGCGGGCTG GACCACCCGG CGGCGCTGGA ACTGCGCGGC
ATTCTGGCCC GCAATCGGGC CTCCGGGCTG ACCCAGGTGG TCTCGGTGCA CGAACTGGAG
CCGGTGGTGG ACATGGCCGA CCTGATGCTG GTGCTGGACG GGGGGCGGCA GGTGTTGTTC
GGCCCGCCCG CCACCGTACT GGACCGGGTG CGCGCCCATG GCATCCGCCC GCCCTGTTCG
TGGACGGCGC GGCGCGAGAT CGTTCCCTAC GAATAG
 
Protein sequence
MIVAKGLRYT HPGTPAGTGP ALDGAEFFVP PGALLCLCGV NGSGKSTLLQ LLAGLLRAEG 
GTLDVAGHHC PGAEAALRRH AALVLQDADM QMLGATVAED LLLTAPPAHT PQGAAALAAA
REAAGRFGLA AHWDSPVHTL SYGQKRKLCL AAALLAAPGL LLLDEPFSGL DHPAALELRG
ILARNRASGL TQVVSVHELE PVVDMADLML VLDGGRQVLF GPPATVLDRV RAHGIRPPCS
WTARREIVPY E