| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1249 |
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| Symbol | |
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| ID | 7173152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1544351 |
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| End bp | 1545502 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643539757 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002435667 |
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| Protein GI | 218886346 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.000156996 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATACC TGTCCACGAT TCACGTCGAT ATTCTCATGT GTCTCGCCTT GCTGCCAGCC
ATTGCAGTGG CGGCCATCAA GCTTGACAGA AGCATTCCTG CGCACCGGCA TCTCATATCA
ATCATGGTGT GCGTCTTCAT CCTGCTTGTG CTTGAAGCAT GCAGCGTGGC GCTGGATGCC
AATTTCAACG CCACCATCCG CGACAACGTG CAGCTTGTCC CCCTCGGCAA GCTGGTCAAC
TGCATCGGCT TCCTGCTGGT GCCCGCGCCC GCCTTTCTGA CGTGGACCTT CCTGCACCAT
TGGACCGGTG TGCGCCTTGC CGCATCTGCC ATCCTGTTCT GGACGCTTCC CCTGGCCTGC
AACGCGGCAC TGGCCATACT CAGCTACAAC GCCGGGCTGC TGTTTTCCAT CGCGCCCGAC
AACACCTACT CGCGCGGGCC GTGGTTCGTC TTATCCCCGG CCATATTCTA CTGCTACCAA
ACCCTGACGG TAAGCGTCCT GATTCGCCAG CGCGCCCGGC TGCGGGCGGA AGAAGCGGCC
CTGTTCGCCC TGGCGTTGGC CTTGCCCGCC ATCACCGCGG CCATCCAACT GCACTACTTC
ACCTTTCTGA CCATCTGGAG CAGTTGGGCC ATCTCGTGCA TCATCCTGCT GGTGACCGTG
TTCATCAATT CGTCCGAACG CGACGAACTG ACCAAACTGG CCAACAGGAC GGCGTACCGC
AACGCCATAG CCAAGGCCCG TCGCATGCGC GAACTGAAGA TGTGCGTGGC CCTGCTGGAC
ATGGACGGGC TGAAAGCCAT CAACGACAGG TACGGGCATG CCGCCGGAGA CCATGCATTG
CTGGCGCTTG CCGAAGCGCT GCGGAAGACC TTTGACGAAG GGTTCAGCGT GATGCGCTTC
GGCGGCGACG AATTCGCCGT TGTCCAGTTC GACAACGACC CCGCCGCGAT CTACGAACGG
CTCTGTACCC TTGAAAACGA TCTGGCGGAG CAGGATGCCG CCTCCGGCAG GCCGTACCGC
GTGGCCTTCA GCTACGGGCT GGCCTGCTCG CGCGACGGCG AAAGCGTTGA CGCCCTGCTG
AAGCGGTGCG ATACGCTGAT GTACGACCGC AAGCGCCAGA AGCACATCAA GGCAGGCGCC
ATCGCCCACT GA
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| Protein sequence | MTYLSTIHVD ILMCLALLPA IAVAAIKLDR SIPAHRHLIS IMVCVFILLV LEACSVALDA
NFNATIRDNV QLVPLGKLVN CIGFLLVPAP AFLTWTFLHH WTGVRLAASA ILFWTLPLAC
NAALAILSYN AGLLFSIAPD NTYSRGPWFV LSPAIFYCYQ TLTVSVLIRQ RARLRAEEAA
LFALALALPA ITAAIQLHYF TFLTIWSSWA ISCIILLVTV FINSSERDEL TKLANRTAYR
NAIAKARRMR ELKMCVALLD MDGLKAINDR YGHAAGDHAL LALAEALRKT FDEGFSVMRF
GGDEFAVVQF DNDPAAIYER LCTLENDLAE QDAASGRPYR VAFSYGLACS RDGESVDALL
KRCDTLMYDR KRQKHIKAGA IAH
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