| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1246 |
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| Symbol | |
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| ID | 7173149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1539988 |
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| End bp | 1541214 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539754 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_002435664 |
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| Protein GI | 218886343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.000908646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAACG GCAAAATCCG CGTCGCGGTC TTTTTCGGCG GGCGTTCGCC CGAGCATGAC
GTCAGCATCG TCACCGGCTT GCAGGTCATC CAGGCCCTGG ACGCCGCGCA GTACGAACCC
GTGCCCGTCT ACGTGGACCG CTGCGGCGTC TGGCGCACCG GCGAAAAGCT GCTGGACCGC
GCCACCTACA TCCCCGCCCG CGACGCCGAC GGCCTGCCCG CCGTGTCGCT GGAAATCGCC
CCCGGCAAGG GCGGCATGCT GGTGGAGCAG ACCTCCAAGC TGTTCGGCAA GCCCAGGCGC
ATTCCCTTCG ACGTGGCCAT CCCCGCCTTC CACGGCCCCT ACGGCGAAGA CGGCGACATG
CAGGGCCTGT TCGAGGCCGT CGGCATTCCC TACACCGGCA TGCGCGTGCT GGCTTCCGCC
ATCTTCATGG ACAAGGCGGC CACCAAGCAG GCACTGGCCG GCACCGGCAT TCCCATGTTG
CCCTGCGCGG TGCTGCGCAA GCCCGTGGGA GGCCTGCTGC CCCCGCGCGC CGACATCGAG
GCCGCGCTGG CGGGCATCAC CCTGCCCGGC TGCCTGAAGC CCGCGCACCT TGGCAGCAGC
ATCGGCGTGG CCAAGGTGGA TTCCATCGAG GACATCGAAG CGGTGCTGCC CGGCCTGTTC
AGGAACGACA CCGTGGCCAT CGTGGAGCCG TATCTGGACG GCTGCGTGGA GTACAACATT
TCGGTGCGGC GCGACGGCGA AGGGCACGCC ACCTCGGCCA TCGAGCGGCC CAAGCGCGAC
AGCGAACTGC TGGACTTTCG CCAGAAGTAC CTTTCGTCGG GCGGAAAGAC CGGCAGCAAG
ACCGGCGGAA TGGGCGGCAC CAAGAGCGCG GGCGATTCCG GCAGCGCGGG CATGCTTTCG
CTGACGCGAG AGATCAACCC CGACCTTCCC GAAAGCCTGG AAGGCCGCAT CCGCGACTTT
GCCGTGCGCA CCTACGCGGC CTTTGGCGGC ACCGGCGCGC CACGCATGGA CTTCATGTAC
GACGCCACCC GCGACGAGGT GTGGCTGAAC GAGGTGAACC CCATCCCCGG TTCGTTCGCG
TTCTTCCTGT GGGAAGCGGC GGAAAGCCCG ATACGCTTCA CCCGGCTGCT CTCGCTGATG
ATCGACGAGG CGCGGGCCAT GGCCCGGCAC ACCGCCTGCC CGGAGGATCC GACCCCCGAG
GCCGCCCGGC TGTTCCCCCG CCGATAG
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| Protein sequence | MSNGKIRVAV FFGGRSPEHD VSIVTGLQVI QALDAAQYEP VPVYVDRCGV WRTGEKLLDR
ATYIPARDAD GLPAVSLEIA PGKGGMLVEQ TSKLFGKPRR IPFDVAIPAF HGPYGEDGDM
QGLFEAVGIP YTGMRVLASA IFMDKAATKQ ALAGTGIPML PCAVLRKPVG GLLPPRADIE
AALAGITLPG CLKPAHLGSS IGVAKVDSIE DIEAVLPGLF RNDTVAIVEP YLDGCVEYNI
SVRRDGEGHA TSAIERPKRD SELLDFRQKY LSSGGKTGSK TGGMGGTKSA GDSGSAGMLS
LTREINPDLP ESLEGRIRDF AVRTYAAFGG TGAPRMDFMY DATRDEVWLN EVNPIPGSFA
FFLWEAAESP IRFTRLLSLM IDEARAMARH TACPEDPTPE AARLFPRR
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