| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1243 |
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| Symbol | |
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| ID | 7173146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1533044 |
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| End bp | 1535248 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643539751 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002435661 |
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| Protein GI | 218886340 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.0172121 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGC GGTTCATCGT CACGGCGCTC ACGGTGGTGT TCATCGGGGT GCTGGTCATT
TCCGGCGTGA CCTATCGCTA TACCCGCGGC GCGGCAGAGG AAATGGCCGG TGCGCAGATG
GTGCAGGCGC TGGAGTTGCT GGACCGCGAC GTATCCGGGC GGGTGCGCGA CATCGCGCGG
CGTACTGTAC TGGTCAGCCA GGAAGAGGTG CTGCAGCTGG CGCTGGAGGA TTCGTACCTG
GGTCGCTCCG CGCGGGTGTC GGCCCAGCGC AGGCTGGATG CCTTCGTGCA GGTTGGCGGG
TTCAGCCATC TGTTGTTGGC CGATCGGGCA GGAATGGTGG TGTTGGCCAC CCTGCCACTG
GACGGAGACC GGATGAACAT TTCCGGTCGC GATACGTTCC GGTCGGCCAT GCGGGGTGTC
TCTGCCCTGG AACTGGTGGA GAAGTCGCGG CTTACCGGGG GGGCGGTGCT GGTCACCGCA
GAACCCGTAC GTGGTTCCGA TGGCGAGGTG GCGGGCATTG TGGCTGCCAT TACCGCCATG
GATGTCTTTG CGCGGGACAT TCTGGACAGC GTGCATCTGG GCGCGACGGG TGGTGCGTAC
ATCCTGAGCG GCACGGGGCG GCTGCTGGCA CGCCCCGCGT GGGCCGGGCC GGAGGATTTT
TCGCCCGACG CACGGTTGCT GGAAATGCTG CGCGAGGCTG ACGGCGCGGT GCAGGGCGCC
ACCCTGACCC CCCAGGCAGT GCGGAGGGCG GGACGGCAAC ACTTGATCAC GTTCCGGCGC
AATGCGGCCA CCGACTGGTT TCTGGTGGTC GAGGCGGACG AAGGGGACAT CCTGGCCCCT
GCGCGCCGTC TGGCTGCCGC CAGCGGGGGC ATATCGCTTG TCACGCTGGC CTGCGTGGCC
CTGGCGCTGG GCGCGCTGCA ACGGGCCATG GCCCGGTTGC GCCGGTCCGA GGACCGTTTT
TCCAGCCTGT TCCGCCTTTC GCCGGACAGC GTTCTGCTGG TGGCGCCGGA GAGCGGCGTG
GTGGAAGACG TCAACGATGC CGCTGCCGTC GCGTTCGGCC TGTCTCGCCA GGCCGTGGCG
GGCCGCAGGG TGGGTGATCT GGGTATTTTT CCCGACGATT CCGCGCGGCA AGGCGTGTGG
GCGCGGCTGA AGGACGAAGG AACCATCCGC AACGTGGAAG TGGCGGGGCG CGCCCCGGGT
GGGGAGGATG GGGCAGGCGG GGCAGATGGG TCGGGCGGGC GGGAAGTGTT CCATTCCCTC
TCCGGCCAGG CCATGGACAT CGGTGGCAGC CCCCTGTTCA TGCTGGTGCT GCGCGACGTG
ACCGAACTGA AGAAGATGCA GGCGGTGATG ATCCAGACCG AGAAGATGAT CTCGGTGGGG
GGCATTGCGG CGGGCATCGC CCACGAGATC AACAACCCTC TCGGCGCCAT CATGCAGGCT
TCGCAGAACA TGCAGCAGCG CATGAACACC GTGCTGCCCG CCAATATCGC CGCGGCGCAG
GAGGTGGGGC TGGACCTTGA TGCCCTGCAA CGCTACCTGC AGATACGCAA GGTTGACCGG
TTCATCGAGG ACATCCGGGC GGCGGGCATT CGTGCCTCGG CCATCATCCG GCACATGCTG
GACTTCAGCC GCGGCAGCGC CGCACGCAGC ACCGCCTGCG ACCTGCGGGG GCTGATGGAT
CGCGCCGTGA ACCTTGCAGC CAGCGACTAC GACCTGAAGA AGAACTACGA TTTCAGAAAG
ATCCGCATAG ACATTCACCT GGCGGACGGC CTGCCCCCGG TGCCCTGCGT GGAGACGGAG
GTGGAACAGG TGCTGCTGAA CCTGCTGCGC AACGCGGCGC AGGCACTGGC GGGTATGGAC
CCGCCCCGCG ACAACCCGCA CATCGTGCTG CGCGCCTTTT CGCTGGCGGG GTGGCTGCGC
CTGGAGGTGG AAGACAACGG CCCCGGCATG ACGCCGGAGG TGCAGCGCCG CATCTTCGAG
CCGTTCTATA CCACCAAGCC GCCGGGGGTG GGCACGGGGC TTGGCCTGTC GGTGTCGTAC
TTCATCATTA CCAAGGGGCA CGAGGGGCGC ATGGACGTGG AGTCGCGTCC TGGCGAGGGC
AGCGTGTTCC GCGTCGACCT GCCCTTGGGC GGACTGTCCA CGGGGCCGGG GCCTTCCGGG
CGTTCAGGCG GCGGGGATAT CCCCCCGGAT GGCGCCTTGT CCTGA
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| Protein sequence | MPERFIVTAL TVVFIGVLVI SGVTYRYTRG AAEEMAGAQM VQALELLDRD VSGRVRDIAR
RTVLVSQEEV LQLALEDSYL GRSARVSAQR RLDAFVQVGG FSHLLLADRA GMVVLATLPL
DGDRMNISGR DTFRSAMRGV SALELVEKSR LTGGAVLVTA EPVRGSDGEV AGIVAAITAM
DVFARDILDS VHLGATGGAY ILSGTGRLLA RPAWAGPEDF SPDARLLEML READGAVQGA
TLTPQAVRRA GRQHLITFRR NAATDWFLVV EADEGDILAP ARRLAAASGG ISLVTLACVA
LALGALQRAM ARLRRSEDRF SSLFRLSPDS VLLVAPESGV VEDVNDAAAV AFGLSRQAVA
GRRVGDLGIF PDDSARQGVW ARLKDEGTIR NVEVAGRAPG GEDGAGGADG SGGREVFHSL
SGQAMDIGGS PLFMLVLRDV TELKKMQAVM IQTEKMISVG GIAAGIAHEI NNPLGAIMQA
SQNMQQRMNT VLPANIAAAQ EVGLDLDALQ RYLQIRKVDR FIEDIRAAGI RASAIIRHML
DFSRGSAARS TACDLRGLMD RAVNLAASDY DLKKNYDFRK IRIDIHLADG LPPVPCVETE
VEQVLLNLLR NAAQALAGMD PPRDNPHIVL RAFSLAGWLR LEVEDNGPGM TPEVQRRIFE
PFYTTKPPGV GTGLGLSVSY FIITKGHEGR MDVESRPGEG SVFRVDLPLG GLSTGPGPSG
RSGGGDIPPD GALS
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