| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1222 |
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| Symbol | |
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| ID | 7173125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1505650 |
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| End bp | 1507710 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643539731 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002435641 |
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| Protein GI | 218886320 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.0583301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTGC GCCGCTTCCA GCGCCTGGGG CTGCAACAGA AGTTCTTCAT CACCATCCTG
GTGGTGATCA TGGCCATCAG CGGCACCATC GCCCTGCTGG CCCGGTGGAT TCTGGTATCC
GGCCTGACGG CGGAACTGGA ACTGCGCGGC GCGGCCATTG CCCACAGCGT GGCGGCGCGC
GGGGCGGGCT ACATACTGGA CAACGACGAG GCCCAGCTGG TGGGGCTCAT CTTCGACGAG
GCCCAGCTGC GCGAACGGCA CCAGTTCATC GCCTACATCT TCGTCACCGA CCCTCAGGGC
ACCGTGCTGG CCCACACCTT CATCAAGGCG TTTCCGGAAT ACCTGCGCAT GGCCAACCCC
CTGCCCGACG GCGCGGCCAA AAGCGTGGAA CTGGTGGACG TGATGGGCAT GTCGGCCTAC
GACATCGCCG TGCCGGTGAA GGAGGGGCTG TACCGCATCG GCGACGTGCA CGTGGGCCTC
AGCAAGGACC ACATGGACAG CCTGGTGGGC AAGCTGCGGG TGACCTTTCT GGGCTTCATC
ACCGCCGTGG TGGTGATCAC CTTCTTCATC AGCCACTATC TCGCCCGGTA CATCACCGCG
CCGGTCACGC GGCTGACGCG CATTTCCGAC GATCTTTCGC GCGGCAACTT CAACACCGCC
GTGGACCTCG ACGTGCCCGA CGCGGGCTGG GACATCCACG ACTGCCCCGC CTACAGCAAC
ACCGACCTGC CGTGCTGGCA CTTCGACGAG CAGCGCCGCG GCCCGCGCCA GGCGCCGGAA
AGGCTGCACA GCTGCCCCAC CTGCGTGTTC TACCGCAAGC GCGGCGGCGA CGAGGTGATC
CAGCTGGCCG ACTCGTTCCG CAACATGGTG TGGTCCATCC GGCTGTACCG CAAGCGGTTG
CAGGAATCGG AAGGCAAGTA CCGCTCGCTG TTCGACAGCG GGCCGGACCC CATTTTCGTG
GTGGACTGCA CCGACCTGCG CATTCTGGAC GCCAACCCGC GCGCCGTGGA AATGTACGGC
TACACCCGCG CAGAGCTGAA CGGCCTGCCG CTCACCGCGC TGGGCGGCGA CGTGATGCGC
GAATGCAGCG CCGTGTTCGA CACCGTGTTC GATGGCGGCG ACGCGGCGGG CGGCTGCCTG
AACATCCCCA AGGCCATGCA GGTGCGCAAG GACGGCAGCG TGTTCCACGT CAACCTGCAC
GCCTGCCCCA TCAGCTATCG CGGGCGGCCC GCCATCATCG TGTCCACCAC CGACATCTCC
GAAATGATGG ACAAGGACGC CCAGATCATC CAGGCGGCCA AGATGAAGTC GCTGGGCGAA
ATGTCCGCCG GGGTGGCCCA CGAACTGAAC CAGCCGCTCA ACGCCATACG CATGGGCAGC
GACTTTCTGT CGCTGGTCAT CGAGCAGGGG CTGCCGGTGC CGCAATCGCG CCTGCACGAG
GTGGCGCGCG ACATCTGCAC CCAGGTGGAC CGCGCCACGG AAATCATCAA CACCCTGCGT
TCGTTCGGTC GCAAGGCCGA TACGGTCATC GAGCCGCTGG ACATCAACCG GCCCACCCGC
GCCGTGCTGC CGCTGGTGGA GCGCCAGTTC CTGCTCCAGA ACGTGGAGGT GAAGCTGGAC
CTGGCCGAGG GGCTGCCCCC GGTGCGCGCC CACGAAAACC GCTTGCAGCA GGTGTTCTTC
AACCTTGTGA CCAACGCCCG CGACGCCATC CTGGACCGCG CCCGCACCGA CGGCGGACTG
CGCGGTGTAA TCACCATCGC CACCCGGGCC GAGGCCGACG GCAACGCCGT GGTGGCCACC
GTGTCCGACA ACGGCGCGGG CATTCCAGAG GCGCTGCGCG AGCAGATATT CCAGCCGTTC
TTCACCACCA AGGTCACGGG CCAGGGCATG GGCCTTGGGC TGTCCATCGT GTACGGCATC
GTGCGCGACT ACGGCGGCGA CATCCGCATC GAAAGTACGG AGGGCAAGGG CACCGCGTTC
CACGTGCGCC TGCCCGCCCA CCGCGATACC CCGCCCCACG GCGGCAAAAA GGACGACAGC
CATGCGCATC CTGGTGATTG A
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| Protein sequence | MILRRFQRLG LQQKFFITIL VVIMAISGTI ALLARWILVS GLTAELELRG AAIAHSVAAR
GAGYILDNDE AQLVGLIFDE AQLRERHQFI AYIFVTDPQG TVLAHTFIKA FPEYLRMANP
LPDGAAKSVE LVDVMGMSAY DIAVPVKEGL YRIGDVHVGL SKDHMDSLVG KLRVTFLGFI
TAVVVITFFI SHYLARYITA PVTRLTRISD DLSRGNFNTA VDLDVPDAGW DIHDCPAYSN
TDLPCWHFDE QRRGPRQAPE RLHSCPTCVF YRKRGGDEVI QLADSFRNMV WSIRLYRKRL
QESEGKYRSL FDSGPDPIFV VDCTDLRILD ANPRAVEMYG YTRAELNGLP LTALGGDVMR
ECSAVFDTVF DGGDAAGGCL NIPKAMQVRK DGSVFHVNLH ACPISYRGRP AIIVSTTDIS
EMMDKDAQII QAAKMKSLGE MSAGVAHELN QPLNAIRMGS DFLSLVIEQG LPVPQSRLHE
VARDICTQVD RATEIINTLR SFGRKADTVI EPLDINRPTR AVLPLVERQF LLQNVEVKLD
LAEGLPPVRA HENRLQQVFF NLVTNARDAI LDRARTDGGL RGVITIATRA EADGNAVVAT
VSDNGAGIPE ALREQIFQPF FTTKVTGQGM GLGLSIVYGI VRDYGGDIRI ESTEGKGTAF
HVRLPAHRDT PPHGGKKDDS HAHPGD
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