Gene DvMF_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1220 
Symbol 
ID7173123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1503023 
End bp1503805 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID643539729 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002435639 
Protein GI218886318 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.0566189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGG TTTTTTCGCG CAGGGGGCTG TGGATGGACG GAGTGCGCGG CGTGCTCCCG 
CACGGGGAGG CAAGGCGGCG CGCCGTGCCC GCCACGGGAC CGGCAACGCG GTTCGGTCGG
CTGCATCGCG GCGTGCTGCT GGTTGCGTGC CTGCTGGCGT TTGTCGTGGC TTCGGTCACC
ATGGCCCGGG CGGGGCAATC TGCCGTGCCG CAGGAGCAGC CCGGTGCGGG TGCGCATGAT
GCCGCAACCC CCTGGCCCGC GGGCGCGCGC TTTCCGGACA TCGCCCTTGG CCCCGCTGCG
CCCAGCCCGG ACATGGCCAT GCCCGAGCGT GCGCCCGGTG ACCGCGAAGG GCTGCCCGCC
CGCCTTTCCG ACCTGCGCGG TCAGGTGTTC ATCGTGAACC TGTACAGCTG GTTCTGCGCC
CCCTGCCAGG AGGAAGCCCC GGCCCTGCGC GCTCTGCACG CGCGGATCGC GTCCGTCGGC
CAGGGTGCAT CGGGCAGCCG CGGCGAACTG GCCGGGCGGG TGCGGCTGGT GGGCATTGCC
GCCGGTGACG ACTGGAACCT TGTGCAGGCC TTTCGCCAAC GGCACGGGCT GGCCTTTCCC
CTGTTCGCAG ACCCGGAGCT GGCGCTGCAC GGCCAGCTGG GCAACCTGCC GGTGCCGTTC
ACCTGGGTGC TGCGGCGCGA GGCGGACGGG TTTCGGGTGC TGTTCACCCA TGCCGGGGCG
CTTTCCGGCA CGCCGGCGGA CTTCCTGGAC CGTGTGCTGG CGGCGGCAGG GCCGCTTTCG
TGA
 
Protein sequence
MASVFSRRGL WMDGVRGVLP HGEARRRAVP ATGPATRFGR LHRGVLLVAC LLAFVVASVT 
MARAGQSAVP QEQPGAGAHD AATPWPAGAR FPDIALGPAA PSPDMAMPER APGDREGLPA
RLSDLRGQVF IVNLYSWFCA PCQEEAPALR ALHARIASVG QGASGSRGEL AGRVRLVGIA
AGDDWNLVQA FRQRHGLAFP LFADPELALH GQLGNLPVPF TWVLRREADG FRVLFTHAGA
LSGTPADFLD RVLAAAGPLS