| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1188 |
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| Symbol | |
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| ID | 7173091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1466201 |
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| End bp | 1467364 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539698 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002435608 |
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| Protein GI | 218886287 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.12301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG CTGCCCATTA CGCCCGCCTG GGCCTTGGGA TCGCCTTCGA AAAGGTGATG
GAAGGCGCGC GCCTTTCGCC CGAAGAGGGC CTGGCGCTGT TCCACTGCCC GGACATCACC
GCCGTGGGGG CCCTGGCCCA CCACGCGCGC ACCCGCCTGC ACGGCGACAG AACCTATTAC
GTGCTCAACC GGCACGTCAA TTACACCAAC ATCTGCGTCA ACGGCTGCCT GTTCTGCGCC
TTTCAGCGCG AACGCGGGCA GGCCGGTTCC TTCGCCCTGA CGCCAGACGA CATCCTGCAC
CGCGTGCTGG ACGACAGGGG CACCCCGTTC TCCGAGGTGC ACATAGTGGG CGGCTGCCAC
CCGGACCTTG GCCTTGCCTG GTTCGAGGAC GTCATCAGAC GGATTCGCAA GGCCCGCCCC
CAGAGCATCG TCAAGGCGTT CACCGGGGTT GAAATCGCCC ACTTCGCCGC CATGGAAGGC
ATCTCCACGC TGGACGTGCT GCGCCGCCTG CAGGACGCGG GCCTGGCCAT GATGCCCGGC
GGCGGCGCCG AAATCTTTGC GCCCGAAGTA CGCACCAGAA TCTGCCCGCG CAAGGCCACG
GCGGACGAAT GGCTGCGCGT GGCGGGCGAG GCGCATTCCC TCGGCATCCG CACCAACTGT
TCCATGCTGT ACGGGCACAT CGAGACCTTC GAGCACCGCG TGGACCACCT GTGCCGCCTG
CGCGAGCAGC AGGACAAGTC CGGCGGGTTC ACCTGCTTCA TCCCCCTGCC CTTCCTGACG
GAAAACAGCC TGCTCAAACT CCCGCCCGAA CGGGTGGGCG AGCACGTGGG CCTCGACCGG
CTGCGCACCG TGGCCGTCAG CCGCCTGATG CTGGACAACA TTCCCCACGT GAAGGCCTAC
TGGGTGATGA TGGGCGTCAA GATGGCCCAG ACCGCCCTGT ACTTCGGTGC CGACGACCTG
GACGGCACCA TCGTCGAGGA ACGCATCGGC CACGACGCCG GGGCCGATTC CGCCCAGTCG
CTCACCGTGC CCGAACTGGA ACTGATGATC CGCCGCTCCG GCTTCACCCC GGTGCGCCGC
GACTCGCACT TCAACCCCGT GGCCGACCCG GACGCCATCC GGAACGACGC CGGGCACGCC
GCAACGCCGG AGGTCCGGGC ATGA
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| Protein sequence | MLDAAHYARL GLGIAFEKVM EGARLSPEEG LALFHCPDIT AVGALAHHAR TRLHGDRTYY
VLNRHVNYTN ICVNGCLFCA FQRERGQAGS FALTPDDILH RVLDDRGTPF SEVHIVGGCH
PDLGLAWFED VIRRIRKARP QSIVKAFTGV EIAHFAAMEG ISTLDVLRRL QDAGLAMMPG
GGAEIFAPEV RTRICPRKAT ADEWLRVAGE AHSLGIRTNC SMLYGHIETF EHRVDHLCRL
REQQDKSGGF TCFIPLPFLT ENSLLKLPPE RVGEHVGLDR LRTVAVSRLM LDNIPHVKAY
WVMMGVKMAQ TALYFGADDL DGTIVEERIG HDAGADSAQS LTVPELELMI RRSGFTPVRR
DSHFNPVADP DAIRNDAGHA ATPEVRA
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