| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1155 |
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| Symbol | |
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| ID | 7173057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1416747 |
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| End bp | 1417547 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539667 |
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| Product | RNA methyltransferase, TrmH family, group 1 |
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| Protein accession | YP_002435577 |
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| Protein GI | 218886256 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.043355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA ACCTGACGGT GGTACTGGTA AAGACCCGGT TTCCGGAAAA CGTGGGCATG
GTGGCCCGGG CGTGCGCCAA CATGGGCGCG CGCGACATCG TGCTGGTGGA CCCGGAACGC
TGGAGCGAGG CGGATGGCGA CCCGGCCAAG GCGGTGCCGC TGGCCACGCC CAAAGGGCAG
GACATCCTGT CCGGGGTGCG CGTGGTGGGC ACGCTGGCCG AGGCGGTGGC CGACTGCGCT
GTGGTGTTCG GCACCACGGC GCGCACCGGC GGCTGGCGGC GCGAGCTGCT TTCACCCGAG
CGCGCGGCGG CAGAGGCCTG CCCGGTGCTG GCCGGAGGCG ACCGGGTGGC CGTGGTATTC
GGTCCGGAGG ACCGGGGGCT GACCAATGAC GAGATCGAGC ACTGTCACCG CCTGCTGACC
ATCCCCACCG CGCCGGAAGC CTCGTCGCTG AATCTGGCCC AGGCAGTGCT GGTGGTGCTG
TACGAATGCC TGAAGGGCAC GGCGACGCAC CCCTTCCGCC CCGGCCCGGC ACCGGATTCA
CGCCTGGCCA ACCACGCGGA ACTGGAACTC CTGCACGACA CCCTGCGCGA CACCCTGCTG
GCCATCGACT ACCTGCGCGC CGACAACCCG GACTACTTCA TGATGCCGGT GCGCCGTTTC
CTGGGGCGTA CCCGACTGCG CCGCCACGAA TTCGACCTGG TCATGGGCGT GTGCCGCCAG
GTGAAACGCA TGGCCGCCCT GGCCAACGCC GCCCCCGCCA CGGAAAACAC GCCCCCGGAC
GGCACCGGAA ACGCAAACTA G
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| Protein sequence | MLHNLTVVLV KTRFPENVGM VARACANMGA RDIVLVDPER WSEADGDPAK AVPLATPKGQ
DILSGVRVVG TLAEAVADCA VVFGTTARTG GWRRELLSPE RAAAEACPVL AGGDRVAVVF
GPEDRGLTND EIEHCHRLLT IPTAPEASSL NLAQAVLVVL YECLKGTATH PFRPGPAPDS
RLANHAELEL LHDTLRDTLL AIDYLRADNP DYFMMPVRRF LGRTRLRRHE FDLVMGVCRQ
VKRMAALANA APATENTPPD GTGNAN
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