Gene DvMF_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1103 
Symbol 
ID7173004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1352724 
End bp1353293 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID643539614 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002435525 
Protein GI218886204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.0923259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACA CCACGCCCCT TGCCGTCACC CCTGTTTCCG CTTCAGCCAG CCTGGGGCCC 
GTCCGATCTG TCGGCATGCC GCGCCCCATG TTCCGCTGCA TGTCACGCCC CGTATCGGGC 
GCCGTCCTGC CGTGCCTGCT GCTGACCCTG CTGCTGACCG GATGCGCCCT GCCGCGGATC 
GGCATCTATC AGGATCCGTT GTCCGGCCCG GAACACCTGG AACTGGGCCG CGCCTACGAG 
CAGAAGGGCG AGCTGGATCT GGCCCGGCGC GAATACGCCG AAGCCGTGCG CGACGACGTG 
CCCCAGGCCC ACCTGTTCCT GGCCAACCTG TTGTTCCAGA AGGGCGAGCT GGAAGAGGCG 
GAAAGCCACT ACCGCAAGGC CATCCGCTCC CTGCCCGAGG CGGAATCCGC CCCGGCGCGC 
AACAATCTGG CCTGGCTGCT GCTCACGCGC GGTGAACGGC TGGAGGAAGC GCAACGCCTG 
GCCGAAGAGG CCGTGCGCCT TGCCGACGAC GCCCACCGCC AGAGCTTCGA GGACACCCTG 
AACCAGGTGA AGGCCGCGCG AAACAAGTAG
 
Protein sequence
MPHTTPLAVT PVSASASLGP VRSVGMPRPM FRCMSRPVSG AVLPCLLLTL LLTGCALPRI 
GIYQDPLSGP EHLELGRAYE QKGELDLARR EYAEAVRDDV PQAHLFLANL LFQKGELEEA 
ESHYRKAIRS LPEAESAPAR NNLAWLLLTR GERLEEAQRL AEEAVRLADD AHRQSFEDTL 
NQVKAARNK