| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1038 |
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| Symbol | |
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| ID | 7172934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1260087 |
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| End bp | 1261205 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539545 |
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| Product | twitching motility protein |
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| Protein accession | YP_002435461 |
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| Protein GI | 218886140 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA TCGACCAGTT CTTCCACATC CTGCACGGGC TTGGCGGCTC GGACCTGCAC
CTTTCCAGCG GCTGCACGCC CATGGTGCGC GTGCACGGCA CGCTGCAACG GCTGGATCAC
CCCGCGCTGG ACGACGCCAC CCTTGCCGCC ATGCTGGACG AGATCATTCC ACCCGCCCGG
CGCGACGAAT TCGCCGCCAG CGGCGACCTG GACTTCGGCT ACGCCGTGCC CGGCATGGCC
CGCTACCGCG CCAACTTCTA CCGTCACGAG CGCGGCGTGG GCGCGGCCTT TCGCGAGATT
CCAGGCAACA TCCCCTCGGT GGAGGCGCTG GGCCTGCCCC CGCTGCTGCG CGACCTGGCC
ATGCTGCCCA AGGGCCTCGT GCTGCTGACC GGTCCCACCG GCAGCGGCAA GTCCACCACG
CTGGCGGCCA TGATAGACCA CGCCAACACC CACCGCCGCG ACCACATCAT CACCATCGAA
GACCCGGTGG AATTCGTGCA CGAACCGCGC GGGTGCCTGA TCAACCAGCG CGAGGTGGGA
CGCCACACCA AAAGCTTTGC CGCCGCCCTG CGCGGTGCCC TGCGCGAGGA CCCGGACATC
ATTCTGGTGG GCGAAATGCG CGACCTTGAA ACCATCAGCC TGGCGCTGGA GGCGGCGGAA
ACCGGGCATC TGGTGCTGTC CACGGTGCAC ACCATATCCG CGCCCAAGAC CATCGACCGC
ATCGTCGAGG TGTTTCCGTC CGAGATGCAG GCCCAGATCC GCACCAGCCT TTCGGAAACC
CTGCAGGCCG TCATCTCGCA GGTGCTCTTT CCGCGCGCGG ACAGGCCGGG CCGGGTGGCC
GCGCTGGAAA TCATGCTGGG CGTGCCCGCC GTGCGCAACC TGATCCGCGA AAGCAAGACC
TACCAGCTGA CCAGCGTGCT GCAAACCGGC AAGAACGCGG GCATGCAGAC CTTGGACGAC
GACATTCTGC GGTTGCTGGG CGCGGGGCTG ATCAACCCGC GCGACGCCTC CGTGCACGTG
GCCGACAAGC CGCGCTTCAA GCCGTATCTG GCCGGGGCAG GCGCCACCTA TGTGGCGCGC
GCGGATAACG CGGCGGGCTT CGCTGATGAC GACTTCTGA
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| Protein sequence | MARIDQFFHI LHGLGGSDLH LSSGCTPMVR VHGTLQRLDH PALDDATLAA MLDEIIPPAR
RDEFAASGDL DFGYAVPGMA RYRANFYRHE RGVGAAFREI PGNIPSVEAL GLPPLLRDLA
MLPKGLVLLT GPTGSGKSTT LAAMIDHANT HRRDHIITIE DPVEFVHEPR GCLINQREVG
RHTKSFAAAL RGALREDPDI ILVGEMRDLE TISLALEAAE TGHLVLSTVH TISAPKTIDR
IVEVFPSEMQ AQIRTSLSET LQAVISQVLF PRADRPGRVA ALEIMLGVPA VRNLIRESKT
YQLTSVLQTG KNAGMQTLDD DILRLLGAGL INPRDASVHV ADKPRFKPYL AGAGATYVAR
ADNAAGFADD DF
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