Gene DvMF_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0854 
Symbol 
ID7172743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1032199 
End bp1032645 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID643539355 
ProductMammalian cell entry related domain protein 
Protein accessionYP_002435278 
Protein GI218885957 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.102404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATTCGCGAGA AACATCGGTC GGCATCTTCG TGCTTATCGG GCTGCTGTGC 
GTCGGCTACC TCACCATAAA GCTGGGGCGC ATGGAACTGT TGTCCGACAA GGGCTACACC 
GTGCACGCCC GGTTCACCTC CATCACCGGC CTGCGCGTGG GGGCGGAGGT GGAAATCGCG 
GGCGTGCCCG TGGGGCGCGT GGCGGGCATC AACCTGGCGC CGGACAAGCC GGTGGCTGTG 
GTCAGCCTGC GCATGCGCGA AGGCGTGCAC CTGACCGACG ATGTCATCGC TTCGGTAAAG 
ACCAGCGGCC TCATTGGCGA CAAGTACATC AAGCTTTCGC CCGGCGGTTC TCCGGACCAG 
CTTGGCGAAG GCGACGAAAT CACGGAAACC GAATCGGCCA TCGACATCGA ATCGCTGATC 
AGCAAGTACG TGTTCGGAGG AGTCTAG
 
Protein sequence
MKKYSRETSV GIFVLIGLLC VGYLTIKLGR MELLSDKGYT VHARFTSITG LRVGAEVEIA 
GVPVGRVAGI NLAPDKPVAV VSLRMREGVH LTDDVIASVK TSGLIGDKYI KLSPGGSPDQ 
LGEGDEITET ESAIDIESLI SKYVFGGV