| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0840 |
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| Symbol | |
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| ID | 7172729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1014472 |
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| End bp | 1016403 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539341 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_002435264 |
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| Protein GI | 218885943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.049249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTA CCTACCCCGC CTTCATCGAG CCCTTCGACC TGTACATGTT CGGCAAGGGC
GAACACTGGG ACCTTTACCG GGTGCTCGGC GCGCATCCCG TGGCGCAGGA CGGAGCGGAA
GGCTACCGGG TGGCCGTGTG GGCGCCCTCT GCCCGCGAGG TGTATCTGGT GGGCGATTTC
AACGACTGGC GCTGGGGCGA ATATCCGCTG TACCCGGTGG GCGTTTCCGG CGTGTGGGCG
GCCTTCGTGC CCGGCATGCG CAAGGGCGCG CTGTACAAGT TCGGCATCCG CACCGGGGAG
GCGGGCGACG GGCGCATCGT CTACAAGACC GACCCCTTTG CCCTGTACGC CGAAATGCGT
CCCGGCGTGG CGGCAGTGGC CTGGGACATA GACAATCACC AGTGGGCCGA CGGCGACTGG
ATGCAGTGCC GCGCCGAGGC GGGGCCGCCG CTGCGGCAGG CCGTGTCCAT CTACGAGGTG
CACGCGGGCT CGTGGCAGCG CAAGACCGAT GGCACGGGCG TGGGCGGCCA CCCCTTCCTG
TCGTGGGACG AACTGGGCGA CGGGCTGATC CCGCACGTGC AGAACCTGGG CTTCACGCAC
ATCGAGCTGC TGCCCGTGGC GGAACATCCG CTGGACCAGT CGTGGGGCTA CCAGACCGGG
CACTACTATG CCCCCACGTC GCGCCACGGA ACGCCGGAAG ACTTCAAGCG CTTCGTGGAC
CGCTGCCATC AGGCGGGCAT AGGGGTCATT CTCGATTGGG TGCCCGCGCA CTTTCCCAAG
GACGACTGGA GCCTTGGCCG CTTCGACGGC ACGGCCCTGT ACGAGCATCT GGACCCGCGC
CGGGGCGAAC ACCCGGACTG GGGCACCTTC ATCTTCAACT ACGGTCGGCA TGAGGTGCGC
AACTTCCTGC TGGCCAACGC CCTGTACTGG CTGCGCGAAT TCCACATCGA CGGCCTGCGC
ATGGATGCCG TGGCCTCCAT GCTCTACCTC GACTACTCGC GCGAGGGCGG CGACTGGCTG
CCCAACGACC ATGGCGGGCG CGAAAACCTG GACGCCGTGG AATTCCTGCG CCAGCTCAAC
GTGGTGGTGC ACGGGCAGTT CCCCGGGGCC ATGACCATAG CCGAGGAATC CACGGCCTGG
GCCGGGGTTT CGCGCCCGGT GTACACCGGC GGCCTCGGCT TCACCTTCAA GTGGAACATG
GGCTGGATGC ACGACACGCT GAACTACTTC CGGCACGAGC CGGTGCACCG CGCCTACCAC
CACAACGCGC TGACCTTTTC GCTGTTGTAC GCCTTCACCG AGAATTTCGT GCTGCCGCTC
TCGCACGACG AGGTGGTGCA CGGCAAGGGC GCGCTGCTGT CCAAGATGCC CGGCGACGCG
TGGCAACAGC AGGCCAGCCT GCGCGCGCTG TACGCCTACA TGTGGGCGCA TCCGGGAAAG
AAGCTGCTGT TCATGGGCGG CGAATTCGGC CAGTGGAACG AATGGGACGA AAGCGGCGCG
CTGGACTGGT GCCTGTACCA GTTCCCGGCG CACGGGGGCA TCCACGCCCT GCTGCGCGAC
CTGAACTCCA TCCTGCGGCG CGAACCGGCC ATGCACGCGC ACGACCACGA CTGGACGGGC
TTTCGCTGGA TGGACTTTTC CGACTGGGGC GGCTCGGTGA TCAGCTTCGT GCGCCAGTGC
CCGGACGGGG AGGGCGCCCC GCCCGTGCTG TGGGTGTTCA ACTTCACCCC GGTGGTGCGC
GAATACTACC GGGTGCCCGC GCCCAGGGGC GGCACCTGGC GCGTGGTGCT GAACACCGAC
AGCGAATACT ACGGCGGCTC CAACGTGGGC AACGGCGGCG CATTGCAGGC CCGCACCGAC
GAGTGGGGCG GCGGGCACCA TCTTGTGCTC ACCCTGCCGC CGCTGGCGGG GTTGGCCCTG
ATGCCGGGGT AG
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| Protein sequence | MQLTYPAFIE PFDLYMFGKG EHWDLYRVLG AHPVAQDGAE GYRVAVWAPS AREVYLVGDF
NDWRWGEYPL YPVGVSGVWA AFVPGMRKGA LYKFGIRTGE AGDGRIVYKT DPFALYAEMR
PGVAAVAWDI DNHQWADGDW MQCRAEAGPP LRQAVSIYEV HAGSWQRKTD GTGVGGHPFL
SWDELGDGLI PHVQNLGFTH IELLPVAEHP LDQSWGYQTG HYYAPTSRHG TPEDFKRFVD
RCHQAGIGVI LDWVPAHFPK DDWSLGRFDG TALYEHLDPR RGEHPDWGTF IFNYGRHEVR
NFLLANALYW LREFHIDGLR MDAVASMLYL DYSREGGDWL PNDHGGRENL DAVEFLRQLN
VVVHGQFPGA MTIAEESTAW AGVSRPVYTG GLGFTFKWNM GWMHDTLNYF RHEPVHRAYH
HNALTFSLLY AFTENFVLPL SHDEVVHGKG ALLSKMPGDA WQQQASLRAL YAYMWAHPGK
KLLFMGGEFG QWNEWDESGA LDWCLYQFPA HGGIHALLRD LNSILRREPA MHAHDHDWTG
FRWMDFSDWG GSVISFVRQC PDGEGAPPVL WVFNFTPVVR EYYRVPAPRG GTWRVVLNTD
SEYYGGSNVG NGGALQARTD EWGGGHHLVL TLPPLAGLAL MPG
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