| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0708 |
|---|
| Symbol | |
|---|
| ID | 7172595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 859652 |
|---|
| End bp | 862423 |
|---|
| Gene Length | 2772 bp |
|---|
| Protein Length | 923 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643539208 |
|---|
| Product | Pyruvate, water dikinase |
|---|
| Protein accession | YP_002435133 |
|---|
| Protein GI | 218885812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 0.473538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCACC ACCTTCTGGA ACGCTGGCGC GCACGCAGGG CCGCGCGGCA GGCAGCGGCG
CTGGACACGC TGAAGGCCCG CTATCACGCC TTCCGCATCC TGCTGGAAAA CAACGGGCGG
GCGCTGGAAT GCCTGGCCGG TTTCGACGGC ACATCAGGCA CTACCCGACG CGAACTGGTG
GAGGAACTGG TCTCGCTGAC CGGCGAGCTG GTGGACGGCC TGGACCTGCT GTCCGACGGG
GCGCATCCCG GCCTGTTCGG GGCGTACGGG CACATCGCGG GGCGGGTGGA GCAACTGGGC
GCGGACACGG ACCCGGCGCG GGAGGGGGAG ATTCTGTGCC TTTCACTGGA CGACCTGCCG
CCGGAACAGG CCGGTCTGGC AGGCACCAAG GCCGCCACGC TGGCGCGGCT GCGCGGCTAC
GGGCTGCCGG TGCCGCCCGG GTTCGTGGTC ACCGCCACGG CGGTGGCCCG CCTGCTGGCC
TCGCCGGGGC TGGAGGCGCA GCTGCGCCGC CTGCTGAACG TGGCCGAGGC CGATCCGGGC
AGCCTTGCGG TGACCACCGC GCGCATCCGT GAAGCCATCC TGGCCGCCCC CATGCCCGCC
GAAGTGGAAC AGGCGGTGCG CCGGGCATGG GCTGATCTGG CGGCAGGCCT GCCCCCGGAG
CACGGTCCGT TGCTGCTGGC GGCGCGCAGC AGCGGCACGG CGGAGGACAG GGCAGAGCAT
TCCTTTGCCG GGCAATACGC CACGGTGCTG GGCGTCCGCA CGCCGGAAGC GCTGCTGGAC
GCCCTGCGCG AAGTGGCAGC CAGTGCCTTT GGCCAGCGCG CCCTGGCCTA CCGGCGGCAC
ATGGGCCTGC CGCGCGGCGA GGCGGACATG GCCGTGCTGT GCCAGGCCAT GGTGCCCGCC
CGCACCGCCG GGGTGCTGTT CACGCGCGAT CCTGCCCGTT CGCCGGGCAG CTATCAGGCC
GACGACGAGC GCATGCTGGT GGTGGCCGTG CCGGGCCTGG GCACGCTGGC CGTGGACGGG
GCCGCCCCGG CGGACGTCTA CCTGCCCGCG CGTGACCCGG CGGCGGTGCG GGCGGGCGAC
GTGGAAACAC GCATCGCCCG CAAGACCCTG CGCGAAACAC TGGAACCGGA CGGCACGCTG
GTCCGGCGTC CTGTCCCCCC GGAAGACGCC GAAGCCCCCA CGCTGTCGCC GCCGGAACTG
GCCACGCTGG TGCGGCTGGC CCGCATGGTG GAAGGCGTGG AGGACGGCCC GCAGGACATC
GAATGGGCAG TGCACGAAGC CACCGGCGCG GTGCACCTGT TGCAGGCCCG CCCCCTGAGC
ATGGCCGGGG CCCGCCCACC TTCCGCCCCG CATCAGGACG GCATGGACGG CGCGCCGCTG
CTGCGCGGGG CCTGCGCCTC GCCGGGCAGG GCCGTGGGGC GGGTACACCT TGCGCACAGG
CCCCGCGAAT TCGCGCCGCC GAACGGGACC GCGGCAACAG GACACAATGG AACCGGCGGT
GCTGGCAAAA GCGGCGATAC CGGCGGCGAT GCCGCACCAC ACAACGACGC CCCAGCCGTA
CTGGTGCTGC CGCACAGCAT CCCCGACGCG GCAACGCATC TGGACGGCTA CGCGGCCATC
ATGGTGGAGG CCGGGAACCC GGCAGACCAT CTTTCGTGCG TGGCCCGCGA ACGCGCCATC
CCCATGCTGG TGGGTGTGGC AGGGGCCATG AATCTGGCCG AAGGCACTGG CGTGCTGGTG
GACGCAGGGC GCGGGGCCGT GCTGGAAGTG CCCGACGCCC TGTGGGACGG CGTGCTGGCC
GCCACCCGGC GCGAGGCCGC GCGCAGGCGC ACCCCGCACG ACAGGGAGAC GCCCGGCGAA
CGGGAACTGC GCTCGCTGGT CGTGCCGCTG AACCTTACCG ACGCTTACGG CCCCACGTTC
AACGAACGGG AATGCCGTTC GCTGCACGAC ATCGTGCGTT ACGTGCACGA AAAGGCCGTT
TTGGCCATGT TCCGGGCCGG GGACGAGGTG ATGGAGACGG CGGGAACCCT GTTGCGACGC
GTGGAACTGG GCGTACCCTT CCACGTGCTG GCCATCGATG TGGGCGGCGG TTTCCGGAAC
GGAGCGGCCA ACGGAGGGGC ACGGCGCAAT ACGAGGGGCA CGGCGCTGCA GGCCATTCCG
GAAAACGTGG CCTCGGTGCC GTTCGCGGCG TTGTGCGAGG GGTTGACCAC GCCGGGGCTG
GCCTGGGGCC CGCCCGATGG GGGCGTGCCC GCCGGGCTGC TATCGCGCGC GCTGCTGGAC
GGGCGTGGCG AGAGGCCTGT GGGGGATTTC AACTATGCGC TGGTCTCGCG CGATTACTGC
AACCTCAACG CGCGGGTGGA ATACCATTTT GCCATGCTGG ATGCGCTGTG CACCGACAAC
CCGCGCGAAA ACCACATCCG CTTCCGGTTC AAGGGCGGCG GCACGGGCGG GGCGCGCCGG
GCGCGACGCA TTGCCTTCAT GCGCGAGGTG CTGGCCGGGG CCGGATTCTT CACGGCGGCA
GTGGACGACC TGCTCACGGC CTCGCTGGCA GGGGAACCCG CCGGTGTGAT GCGCCAACGG
CTGGTACTGC TGGGACGGTT GCTGGGCTAC ACCCGCCTGC TGGACGCGGC CATGACCGAC
GACGAGACAC CGGCGCTGTT CGCACGGGCC TTCCTATCCG GCAGGTATGA CACCAAGGAC
GCGCGGGTGC TGCGGGATGC CGCCGGGTTC AATGCCGGAC ACGACGCCAC GGTCGGTTCA
GGACAGAAGT GA
|
|---|
| Protein sequence | MLHHLLERWR ARRAARQAAA LDTLKARYHA FRILLENNGR ALECLAGFDG TSGTTRRELV
EELVSLTGEL VDGLDLLSDG AHPGLFGAYG HIAGRVEQLG ADTDPAREGE ILCLSLDDLP
PEQAGLAGTK AATLARLRGY GLPVPPGFVV TATAVARLLA SPGLEAQLRR LLNVAEADPG
SLAVTTARIR EAILAAPMPA EVEQAVRRAW ADLAAGLPPE HGPLLLAARS SGTAEDRAEH
SFAGQYATVL GVRTPEALLD ALREVAASAF GQRALAYRRH MGLPRGEADM AVLCQAMVPA
RTAGVLFTRD PARSPGSYQA DDERMLVVAV PGLGTLAVDG AAPADVYLPA RDPAAVRAGD
VETRIARKTL RETLEPDGTL VRRPVPPEDA EAPTLSPPEL ATLVRLARMV EGVEDGPQDI
EWAVHEATGA VHLLQARPLS MAGARPPSAP HQDGMDGAPL LRGACASPGR AVGRVHLAHR
PREFAPPNGT AATGHNGTGG AGKSGDTGGD AAPHNDAPAV LVLPHSIPDA ATHLDGYAAI
MVEAGNPADH LSCVARERAI PMLVGVAGAM NLAEGTGVLV DAGRGAVLEV PDALWDGVLA
ATRREAARRR TPHDRETPGE RELRSLVVPL NLTDAYGPTF NERECRSLHD IVRYVHEKAV
LAMFRAGDEV METAGTLLRR VELGVPFHVL AIDVGGGFRN GAANGGARRN TRGTALQAIP
ENVASVPFAA LCEGLTTPGL AWGPPDGGVP AGLLSRALLD GRGERPVGDF NYALVSRDYC
NLNARVEYHF AMLDALCTDN PRENHIRFRF KGGGTGGARR ARRIAFMREV LAGAGFFTAA
VDDLLTASLA GEPAGVMRQR LVLLGRLLGY TRLLDAAMTD DETPALFARA FLSGRYDTKD
ARVLRDAAGF NAGHDATVGS GQK
|
|---|
| |