| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0705 |
|---|
| Symbol | |
|---|
| ID | 7172592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 854036 |
|---|
| End bp | 856669 |
|---|
| Gene Length | 2634 bp |
|---|
| Protein Length | 877 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643539205 |
|---|
| Product | Pyruvate, water dikinase |
|---|
| Protein accession | YP_002435130 |
|---|
| Protein GI | 218885809 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 0.440611 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAATCC TCTCGCACAT GGCCGACCTT CTCGCCCGCT GGCGCGGTTC GCGGGGGCTG
CCGTTCGCGC TGCTCTTCAA GAAGTTCAAG AGCATCCTCG AACGCAACAA CCGCATCCTC
GAACTGATGG CCGACATGGG CGACAAGCTG GGCGGCGAAT ACGTGTTCGA CCGCCAGTAC
ATCGTCGATG CCTGCGAACA ACTGGACGAC CACGTCTTCA AGCTCATCTC GGACATGAGC
GTGCTGGGCC AGCGCAAGAA CGTGGAGCTG TTCCTGGCCT TCGAGCGCAT CCAGCACCAG
TTGCAGGAAG AAATCGCCGG GCGCCACCAT TTCGAGGGGG GACGGCTGGT GCTGCCGTTT
CGCGACATCG GCCCGGATGC CGAGGACGAG GTGGGCGGCA AGCTGGCCCA ACTGGGCGAC
CTGTCCAACC GCCTGCACCT GCGCACGCCC GACGGCTTTG CCATCACCAC GGCGGCCTTC
TTCTCCTTCA TGACCCGCAA CGGCCTGCTG GCGCAGGCCC AGCGCGGCAT GCAGGACTGG
GACGGCACCG ATGGCGGCCT GCGCGAACTT TCCGACCGCA TGCAGCGCGG CATTCACGAT
GCCCCACTGC CGTGGGGGCT GGTGGCCCAG ATCAACGCCA TGGTGGACGT GCTGGGCATG
CGCCGCAAGC AGCCCCTGCG CCTGGCCCTG CGCAGCAGCG CCTGGGGCGA GGACGGCGAC
GCCAGCTTTG CCGGGCAGTA CGCCACGGAG CTGAACGTTC CGCCCGATCG GGTGGTTGAG
GCGTACAAGA ACGTCATCGC CAGCGTCTAT TCCGTGGAGG CGTGGCGCTA CCGGCTGGAC
AGGGGCTTTC GGGAAACCGA GGTGGCCATG GCCGTGGGCT GCCAGCTTAT GGCCCACAGC
CGGGCAAGCG GGGTGCTGTA CACCTGCGCC CTGCACGCTG GCGACAACTG CGAGGCCATG
GTCATCAGCG CCGCGTGGGG CGGCGGCGCC GCCGTGGTGA GCGGCGAGAC GGCCACCGAC
ACCTTTCTGC TGGAACGCAC CCCGCCCTAC CGGATCACCA CCCGCGAAAT CGCCCGCAAG
ACGCGGCGCA TGGTACCCGC GCCCAAGGGC GGCATGACCC GGGAAGACGT GCCCGCCGAC
CTGCGCGACG CCCCCAGCCT GACCGACGCC CAACTGGAGC AGCTGGCGCG CGCCGGCATG
TCGCTGGAAC GGTATCACAA GCGTCCCCAG GACGTGGAGT GGACCTTCGA CGCCGACGGC
GACCTGCACG TGCTGCAATC GCGCCCGCTG TGCTCCACGG GCGACGCGGG CCTGTGCGTG
CCGGTGCAGG ACGCCACCAG CCGGGCAGAG GTCATCCTGT CCGGCAGGGG CATGGTGGCC
CAGCGTGGGG TGGCCGTGGG CCGGGTGGTG CTGGTGGACC ACGCCACGGA CCTCGACACC
TTTCCCGACG GCGGCATTCT GGTGTCCAAG TACACCTCGC CGCGCTATGC GCGGGTCATG
CGGCGGGCGC AGGGCATCAT CACCGACGTG GGCTCGCCCA CCGGGCACAT GGCCACCATT
GCCCGCGAAC AGCGCGTGCC CGCCGTGGTG AACACCGAAG TGGCCACCGA ACTGTTGCGC
GACGGCGAGG AAATCACCCT CGATGCCACC CAGAACGTGG TTTATCGGGG GCGCATCGCG
GAACTGGACC GCTTCGAGCG GACCGAGACC GACGTGTTCG AGGAATCGTA CGAGTACCGA
CTGCTACGCC GCCTGCTGAA GCGCATCTCG CCGCTGAACC TGGTGGACCC GCATTCCGAC
GACTTCAAGC CCAGGGCCTG CCGCACCTAC CACGACATCA CCCGGTACAT TCACGAAAAG
GCCGTGGAGA CGCTGGTGGA CCTCAGCCAG CGGCACGAGG CGCTGCACCA CGCCCCGGCC
CGCCGCCTGC TGGACGGCCC GCCGCTGGGG CTTACCGTCA TCGACGCGGG CGGCGGCACC
GAATGCCTGC CCGAAGAGGC GGGGCTGGTC ACCGGGCAGG TATGCTCCGT GCCGCTGCGC
GCCTTTCTGG ACGGGCTGAC CGAATCGGGC ATGTGGGACA CGGCCCCGGT GCCGGTGGAC
CTTGGCAGCT TCATGTCCAG CTTCACGCGC ACCTTCAGCG CCTCGCAGGC GGGCCCGCGC
GAGGTGGGCC GCAACCTGGC CGTGGTGCTG CGCGAATACA TGAACGTGAA CATGCGCCTG
GGCTACCATT TCAACATCAT CGACGCCTAC ATAGGCAACA CCATCAACGA CAACTACATC
TACTTCCGGT TCCTTGGCGG GGTTACGGAG CTGGTGCGGC GCTCGCGCCG GGCCCGCTTC
GTGGCCGAGG TGCTGGAACG CTTCGACTTT CGCGTGGAGG TTCACGGCGA CCTCGTGGTA
GGCCGTATCA AGAAACTGTC GGAACCGCGC ATGCTGCTGC GCATGCGCAT GCTGGGCGGA
CTGGTGGGCT ATGCCCGCCA GCTGGACGCC CGCATGCACA GCGACGCACA GGTGGCGGAC
CACGTGCGGA CCTTCATGGA GGCAATTTCC ACTGTCGTCG CCACACACCA TGACGACCGG
ATCGAACGGA AGGGAGGCGG ACATGCCGTC ACGACTGCGC ATCCTGGTGC TTGA
|
|---|
| Protein sequence | MGILSHMADL LARWRGSRGL PFALLFKKFK SILERNNRIL ELMADMGDKL GGEYVFDRQY
IVDACEQLDD HVFKLISDMS VLGQRKNVEL FLAFERIQHQ LQEEIAGRHH FEGGRLVLPF
RDIGPDAEDE VGGKLAQLGD LSNRLHLRTP DGFAITTAAF FSFMTRNGLL AQAQRGMQDW
DGTDGGLREL SDRMQRGIHD APLPWGLVAQ INAMVDVLGM RRKQPLRLAL RSSAWGEDGD
ASFAGQYATE LNVPPDRVVE AYKNVIASVY SVEAWRYRLD RGFRETEVAM AVGCQLMAHS
RASGVLYTCA LHAGDNCEAM VISAAWGGGA AVVSGETATD TFLLERTPPY RITTREIARK
TRRMVPAPKG GMTREDVPAD LRDAPSLTDA QLEQLARAGM SLERYHKRPQ DVEWTFDADG
DLHVLQSRPL CSTGDAGLCV PVQDATSRAE VILSGRGMVA QRGVAVGRVV LVDHATDLDT
FPDGGILVSK YTSPRYARVM RRAQGIITDV GSPTGHMATI AREQRVPAVV NTEVATELLR
DGEEITLDAT QNVVYRGRIA ELDRFERTET DVFEESYEYR LLRRLLKRIS PLNLVDPHSD
DFKPRACRTY HDITRYIHEK AVETLVDLSQ RHEALHHAPA RRLLDGPPLG LTVIDAGGGT
ECLPEEAGLV TGQVCSVPLR AFLDGLTESG MWDTAPVPVD LGSFMSSFTR TFSASQAGPR
EVGRNLAVVL REYMNVNMRL GYHFNIIDAY IGNTINDNYI YFRFLGGVTE LVRRSRRARF
VAEVLERFDF RVEVHGDLVV GRIKKLSEPR MLLRMRMLGG LVGYARQLDA RMHSDAQVAD
HVRTFMEAIS TVVATHHDDR IERKGGGHAV TTAHPGA
|
|---|
| |