| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0451 |
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| Symbol | |
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| ID | 7172337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 528382 |
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| End bp | 530808 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643538950 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002434876 |
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| Protein GI | 218885555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 0.950618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCATTT CCGACGATAT TTCCCCTGTG CCTCCCGCCC CCGTTTCCGA GCCGAACGCC
GGGCAGGACG CCGGGCAGGA CGCCGCGCCC GCCCATATGG CCGCCCGCGC GGAAGCCCTG
CGCGACCAGC TGAACTACCA CAGCCACCGC TACTACGTGC TGGACGACGC GGAAATCTCC
GACGCCGAAT ACGATGCCCT GTTCCGCGAA TTGCAGGACA TCGAGGCGGA ATGGCCCAGC
CTGCGCACGC CCGATTCGCC CACCCACCGG GTGGGTGACA CCGTGGTGGC GGCGCTGGAG
ACGCAGGCCC ACACCCTGCG CATGTACAGC CTGGACAACG CCTTTTCGGC GGAAGAGTGG
GACGGGTTCA TCCAGCGCAT GCTGCGGGCA GAGCCGGACG CTCCCACCGC CTTCTGGTGC
GACCCCAAGA TGGACGGTCT GGCGCTGGAA GTGATCTACG AGAACGGGGT GTTCACCACC
GCGCTCACGC GGGGCGACGG CGAAAAGGGC GAAATCGTCA CCACCGCCAT GCGCACCGTG
CGCAACCTGC CGTTGCGCCT GCACGGCGAG GGGCCGCACC CGGCCCGGCT GGAAGTGCGC
GGCGAGGTGG TCATCACCCG CGCGGAATTC GATGCCCTCA ACGCCGCGCG GCGCGGCGCG
GGCGAAAAGC TGTTCGCCAA TCCGCGCAAC GCCGCCGCCG GTTCGGTGCG CCAACTGGAT
GCCTCGGTCA CGGCGGGGCG TCCGCTGCGC TTTCTGGCAT ACGGGGTGGG GCAGGTGGTC
TGGCCTGCGG AGACCAGCGA CGGCGCGGCT TCCGCCGCGC AGGGGCCGGA GGCGCGCTGG
GCCACCCACG GACAGGTCAT GGCCGCGTTG GCGGACTACG GCTTTGGCAC CCCGCCCGAT
GCGCGCCGCT GCGAAACCCC GGCGCAGGTC ATGGCCTACT ACGAAGACCT GGGCCGCCGC
CGGTCGGAAC TGCCCTTCGA TATCGACGGC GTGGTGGCCA AGCTGGACGA CCTGTCCGCG
CAGGCCGCGC TGGGCTACAC CGCCCGCGCC CCGCGCTGGG CCATCGCCCT GAAGTTTCCC
GCCCATCAGG CAACCACCCG GCTGGAGCAC ATCGCCATTC AGGTGGGCCG CACGGGAGTG
CTGACCCCGG TGGCGGAACT GGCCCCGGTG GCCGTGGGCG GGGTTACCGT GTCGCGCGCC
ACCCTGCACA ACGAGGACGA AATCCGCGCC AAGGACTTGC GCGTGGGCGA CATGGTGGTG
GTGCAGCGCG CGGGCGACGT GATTCCGGAG GTGGTGCGCC CGCTGGTGGA CCAGCGCCCC
GCCAGCGGCC TGCCGGAGTT CGAATTTCCC GCCGAGTGCC CCGTCTGCCA TACCCCGGTG
CGCCGCGAAC CCGGCGAGGC CGCGTGGCGC TGCGTCAACG TGGGGTGCCC CGCCGTGGTG
CGCCAGTCCA TCATCCACTT CGTGTCCAAG GCCGGGCTGG ATATTCAGGG CGTGGGCCGC
AGATGGGTGG AACTGCTGGT GGACCGGGGC AAGGTGACCA GCCCGGCGGA CCTGTTCGGG
CTGGACAAGC AGACCCTGCT GGCCTTCGAG CGCATGGGGC CGAAACTGGC GGAAAACTTC
ATCGCCGCCT TTGACACGGC ACGCACCGGG GCCACCCTGA ACCGGCTCAT CTGCGCGCTG
GGCATCCGCC ACGTGGGCGA ACAGACCGCG CGCACACTGG CCGCGCACTT CGCCGACCTC
GACGCGCTGG GCGCGGCACA AGCCGAGACA TTGCAACAAC TTCCGGACAT CGGGCCGGAG
GTGGCCGCAT CCATCCGCGC CTTCTTCGCC AACGAGGGCA ACCGCGCCCT GCTGGAACGC
CTGCGGGGCG TGGGGCTGTG GCCGGTGCGC CCCGTGCGCC CGGAAGCGGA CGCGGCAGGC
GCGCCGGGCG AAGGCAGCGG CCCGCTGGCC GGGCTGCGCG TGCTGTTCAC CGGCTCGCTG
ACCACGCTCA CCCGCTCCGA TGCGGAGCGC CGCGCCGTGG CCGCCGGGGC CAACATCCTT
GGCAGCGTCA GCAAGAAGCT GGACCTGCTG GTGGTGGGTG ACAAGCCCGG TTCCAAGCTC
GACAAGGCCA CGAAACTCGG CATACGGGTA CTGCGGGAAC AGGAATTTCT GGACCTGCTG
GAAGGCAGGG GCGGGGATGT GCCGGAGGAT GGTGATGGAG CGCCCGGCAA CGAGGACGAA
GCGCCCGAAG TTTCGGCGGA TGTTCCCGCC GCCCCTGAAG TTCTCGCCGA TGCGCCCGCC
GCGATCTCTG CCGACGCTTC ATCAGGCGTG GCTCCCGGCG TGTCGGGCGG CCCCGACCGG
GCCGACATGA CCGACAGGAC CGTCAGGACT GACAGCGTCG ACGCACCGGC CATGCCCCGC
AAGAAGGACC AGCATTCGCT GCTGTGA
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| Protein sequence | MSISDDISPV PPAPVSEPNA GQDAGQDAAP AHMAARAEAL RDQLNYHSHR YYVLDDAEIS
DAEYDALFRE LQDIEAEWPS LRTPDSPTHR VGDTVVAALE TQAHTLRMYS LDNAFSAEEW
DGFIQRMLRA EPDAPTAFWC DPKMDGLALE VIYENGVFTT ALTRGDGEKG EIVTTAMRTV
RNLPLRLHGE GPHPARLEVR GEVVITRAEF DALNAARRGA GEKLFANPRN AAAGSVRQLD
ASVTAGRPLR FLAYGVGQVV WPAETSDGAA SAAQGPEARW ATHGQVMAAL ADYGFGTPPD
ARRCETPAQV MAYYEDLGRR RSELPFDIDG VVAKLDDLSA QAALGYTARA PRWAIALKFP
AHQATTRLEH IAIQVGRTGV LTPVAELAPV AVGGVTVSRA TLHNEDEIRA KDLRVGDMVV
VQRAGDVIPE VVRPLVDQRP ASGLPEFEFP AECPVCHTPV RREPGEAAWR CVNVGCPAVV
RQSIIHFVSK AGLDIQGVGR RWVELLVDRG KVTSPADLFG LDKQTLLAFE RMGPKLAENF
IAAFDTARTG ATLNRLICAL GIRHVGEQTA RTLAAHFADL DALGAAQAET LQQLPDIGPE
VAASIRAFFA NEGNRALLER LRGVGLWPVR PVRPEADAAG APGEGSGPLA GLRVLFTGSL
TTLTRSDAER RAVAAGANIL GSVSKKLDLL VVGDKPGSKL DKATKLGIRV LREQEFLDLL
EGRGGDVPED GDGAPGNEDE APEVSADVPA APEVLADAPA AISADASSGV APGVSGGPDR
ADMTDRTVRT DSVDAPAMPR KKDQHSLL
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