Gene DvMF_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0387 
Symbol 
ID7172273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp454678 
End bp455457 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content45% 
IMG OID643538886 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002434812 
Protein GI218885491 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.0965219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGCG TCGTCTTGTT GCGTATGAAA ATATTTTTTC CATTGATTTT GACATTATTC 
ATGAGCGAAG TGGCATTATG CAGTGAAGCA TTCTATGTGA TGTCTGAACA AAATGCTCCT
CCTTACGTTT TCGTCGAGAA CGGGAAAAAG AAGGGAATTG ACTATGACAT CATAACCGAA
GCTGCCAGAA GAATGGGGAT TGATGTCAAG ATAGATTTTG TCCCGTGGCT TCGCATGTAC
AAATCACTCG AAAGTGGAGC ATGCGATGGA GGTTCTGCGT TTTTTCACAT AAAAGAGCGT
GAATCGTTTG TCATATACAT AAATCCTCCA CTACACCATA GCACCTATGC GGTGTTTGTT
CGCAGTGGTG AGGAATTCGA ATATTCTTCC CCTGCAAGCC TTTACGGAAA AAGGGTCGGT
GTAACGCGAG GATACAGGCT GAACAAGGAG TTTTCAGAAG CTGTCACAAG TGGAAAGATC
AACATTGAAG AAGTCGATAA TTCCTCACTG AATATCCAGA AGATGGTGAC CGGTCGCCTG
GACTGCATGG TCAGCAATCG CGATGCGACA CTCATTCAAC TCAAAAACGC AGGACTTTCG
GACAAAATCA TTCCGTTGGA AATTCCTGTC ATTGAACCGA GGGGATTGCA TCTGGTCCTG
TCGCGAGCCG GTCGATATGC CAAGAATCGC GAATTTATCT CACGATTGGA ATCCGTCCTG
CGCGCCATGG AGGATGATGG AACCTTCCAG AATATCTACA GTCTATACGG CCTGCCATGA
 
Protein sequence
MRCVVLLRMK IFFPLILTLF MSEVALCSEA FYVMSEQNAP PYVFVENGKK KGIDYDIITE 
AARRMGIDVK IDFVPWLRMY KSLESGACDG GSAFFHIKER ESFVIYINPP LHHSTYAVFV
RSGEEFEYSS PASLYGKRVG VTRGYRLNKE FSEAVTSGKI NIEEVDNSSL NIQKMVTGRL
DCMVSNRDAT LIQLKNAGLS DKIIPLEIPV IEPRGLHLVL SRAGRYAKNR EFISRLESVL
RAMEDDGTFQ NIYSLYGLP