Gene DvMF_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0357 
Symbol 
ID7172241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp417126 
End bp418022 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID643538855 
Producthistidine triad (HIT) protein 
Protein accessionYP_002434782 
Protein GI218885461 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.0469904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC TCTGGGCGCC GTGGCGCCTC GACTACATCC TGGGCCCCAA GCCCGACAGC 
TGCGTGTTCT GCCTGCCCGA ACACACCGAA GAGGACGAGG CACGCCTGGT CCTGTACCGG 
GGGCGGCACA ATTTCGTGAT CATGAACAAG TTCCCCTACA ACAACGGGCA CCTCATGGTC 
ACGCCGTTCC GGCACGTCAT GGACCTTGCC GCGCTGGAAC CGGACGAAGC CCACGAAATG 
ATGGACCTGC TCCAGACCTG CACCACCATG CTGCGCCAGC GCTTCAACCC GCAGGGCATC 
AACGTGGGGC TGAACCTGGG CGAGGCCGCC GGGGCGGGCA TCCGCGAACA TCTGCATTTC 
CATCTGGTGC CGCGCTGGAA CGGCGATTCG TCGTTCATGG CGGTGATGAG CGAAACCCGG 
GTCATTCCCG AGCATCTGCA TTCCACGTAT CATGCCCTGA AACCCTGTTC GACCGCCTGC 
CCCGCGCGGG ACGGTAAGGA GGCCGACATG CGCTTCGTCA AGGTTCTCGT TCTGGTTCTG 
GTGTTCTTCA TCTCCATGAT GTTCTTCGTG CAGAACAACG CGGTGCTCTC GCAGACGGTC 
ACCCTGAAGC TGGACCTGTT CTTCGACACC GCGTGGAGCT CCATCGCCCT GCCGTTCTAT 
TTCATGGTTC TGTGTGCCTT CCTGATGGGC GCCCTGCTGA CCATGCTGCT GCTCATGATC 
AGCCGCATGC GCGCCGGTGC CGCCCTGCGC CGCGCCAACA AGCGCATCCG CGTGCTGGAA 
AAGGAACTGA ACTCGCTGCG CAACCTGCCG CTGGAAACCG CGCGCAAGAC CCCGGAACCT 
GTGGCCGCCC CCGCGCCCGT TGCCGCCACG GACCCCACCC CGGCCAAGGC CGGCTAG
 
Protein sequence
METLWAPWRL DYILGPKPDS CVFCLPEHTE EDEARLVLYR GRHNFVIMNK FPYNNGHLMV 
TPFRHVMDLA ALEPDEAHEM MDLLQTCTTM LRQRFNPQGI NVGLNLGEAA GAGIREHLHF 
HLVPRWNGDS SFMAVMSETR VIPEHLHSTY HALKPCSTAC PARDGKEADM RFVKVLVLVL 
VFFISMMFFV QNNAVLSQTV TLKLDLFFDT AWSSIALPFY FMVLCAFLMG ALLTMLLLMI 
SRMRAGAALR RANKRIRVLE KELNSLRNLP LETARKTPEP VAAPAPVAAT DPTPAKAG