Gene DvMF_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0318 
Symbol 
ID7172200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp369894 
End bp370697 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content74% 
IMG OID643538814 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_002434743 
Protein GI218885422 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGC TGCTGCGCCG CCTGCTGTCC GGCAGCGGCC CAGACCCGGC CACGCCGTTG 
CGGGGGATGG TCTTCGTGTC CCTGGACTGC GAGATGACCG GCCTGAACCC GGCCCGCGAC
GATCTGCTGG CCGTGGGGGC CGTGGTCCTG CGGGGCATGC GCCTGGATCT TTCCGCCACC
TTTCGCGGCC TGTTGCGCCC GGCCTGCCCG GTGCGGCCCG AAGGTGTGCC CGTGCACGGC
ATTTTGCCCG GAGAAGCGGC CCACGGGGAC GAGGCGGCGG CGCAACTGGC CAGACTGGAC
GCCTGGCTTG CCGGGTGCGC CGCAGTGCCA GGCGCGGGAA ACGGGGCAGA GGCGCCGGTG
GTGCTGCTGG GCTGGTGCCT GGGGCTGGAC GAGGCCTTTC TGGCCGCCGG GCGCAAGCGG
GCCGGATTGC CCGCCCGGAC GCATCCCCGC TGTGACGTGC TGGACCTGTT CAGGCACGTG
CGGGCCCGGG GCGTGGCTGC GCCCTCCGGT CAGGGGGCAA TGCCCCCTTC CGGCGCATCC
CCGCTGCCGT CCACGCACGC CGCGCTGGCG GACATCCCCC TCAAGGATGC GGACCTGTAC
GCGGTGGCCC GTGCGCTGGG GGTGGATGTG CACGGCGCGC ATGACGCACT GGGCGATGCC
TGCATGTGCG CGCAGGTCTT CCAGCGTCTG GTGCCGCTGC TGGAGCGGGG CCTTGGCCGC
AGGGCCGTGT GGGGAGATCT GGCCCGTGCC GCCAATGCGG CAACCTGCGG AGCCCGCAAC
GGGGGCGGAG GCTTCGGGCT GTGA
 
Protein sequence
MKRLLRRLLS GSGPDPATPL RGMVFVSLDC EMTGLNPARD DLLAVGAVVL RGMRLDLSAT 
FRGLLRPACP VRPEGVPVHG ILPGEAAHGD EAAAQLARLD AWLAGCAAVP GAGNGAEAPV
VLLGWCLGLD EAFLAAGRKR AGLPARTHPR CDVLDLFRHV RARGVAAPSG QGAMPPSGAS
PLPSTHAALA DIPLKDADLY AVARALGVDV HGAHDALGDA CMCAQVFQRL VPLLERGLGR
RAVWGDLARA ANAATCGARN GGGGFGL