| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0250 |
|---|
| Symbol | |
|---|
| ID | 7172130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 285258 |
|---|
| End bp | 287207 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643538745 |
|---|
| Product | CgeB family protein |
|---|
| Protein accession | YP_002434675 |
|---|
| Protein GI | 218885354 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4641] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.0474732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCAG TTGACGATAC CCCGCGCCAG ACAGCGCCCC GCCCCGGGCT GGCGGCCCGC
GTGCTGCCTT TGTCCTGCCC GCAGGGCATG GGTGCCGCCC CTGCGTCCTC CAGCCCGGTC
GGCTCGGATG CCACCCCGGC TCCCTTCTGC GACATCGAAG TGACCGTGGA TGGCCGCACC
ATGACCATGC TGGGTTCCGG TGGCCCGGCG CGCGAGTTGG CCCTGCTGGC CCCCTACGAA
AAACTGCGCG CGGATGCGGG TGCCGATGCT GCCCGGTCCG GCACGCCCGG CGGCCCCGAC
ACAACCGTCC CGCCAGTTTC GCCAGTTCCC CCCATCCCGC CAGTCCTGCC CGTCCTTCTG
GGCGCGGGCA CCGGCGTGGC CCTGGACCGC CTGCTGGAAC TGCACCCCGG CCCCGTGGCA
GTGGTGGACC GGTCAACGGA AATCCTTGCC GCCAGCCGCC TGCGTGAACG CCACGCCGAA
GACACCGCCG CCGGGCGCAT CCTGTGGGTG ACCGACGACG ACGCGGACGC GGCCCTGCGC
ACCCTTACCC GCTGGCAGTA CGAGCACGGC GGGCTGCAAC TGCTGCCCCT GCCGCACCCC
TTCTACCTGC GGCTCGACCG CGCCCATTAC GCCCGCCTGC GCGACGTGCT GTCCGCCAGC
GCCCGCTTCA ACTTCTGGGA ACGCGCCGCC TATCCAAAAT TCGCGGACCC TGCCGCCCTG
CCGCGCATGC TGCTGATCAC CAGCCAGTAT TTCCTGATGG GCGAAATCGT CACCGCCTGC
CAGCGCCTGG GCGTGCCCTA CCACCTGCTG ACCCTGGACG ACGACGAGGT GGGCCAGGGC
GAATTCGTGG AAAAGCTGCT GCGCGCCGTG GTGGAATTCC GTCCCGACTT CGCCTTCACC
ATCAACCATC TGGGCGTGGA CCGCGAAGGC GTGCTGACCG ACCTGCTGGA AAAGCTGCGC
CTGCCCCTGG CCTCGTGGTT CGTGGACAAC CCGCACCTGA TCCTCTACCT GTACCGGCGC
ATCGTCAGCC CCTGGACGGC CATCTTCACC TGGGACGCGG ACAACCTGCC CTCGCTGCGC
GGGCTGGGCT TCGAGCACGT GGCCTACCTG CCCCTGGGCA CCGACCCGGT GCGCTTCGCC
CCGCCCGCGT CGCCGCCGCC CGCCAGCCAT CCGTGGCGGG CGCGGGTGTC GTTCGTGGGC
AATTCCATGG TCTACAAGGT GGCCCACCGC ATGAAGGCGG GCATGCTGCC CGCCGCGCTG
CTGCGCTCGT ACCGCGAGGT GGCGGCGGGC TTCGGTGCGC ACGGCGAGCG CTCCGTGGGG
GCCTACCTGC GGGCGCACCA GCCGGAACTG GCCGATGTGT ATGAAAGACT GGGGGGGCTG
GATGCAAGGA ACGGGCGTGA CGCGATGGGC GACGCCGAGC GGCGCCTGTC GTACGAGACC
ATGCTCACCT GGGAGGCCAC CCGCCAGTAC CGCGCCGCCT GCGTGGCCCG CACCCTGCCC
TTTGCCCCGC TGATCGTGGG CGACAAGGGC TGGCGCAAGG TGTTCCGCAA CGCGCCCGCA
GGCTGGCGGC TGCACCCGGA GATCAACTAT TACAAAGAAC TGCCCGCGTT CTACCCCCTG
TCGGAGATCA ACTTCAACTG CACCAGCAAG CAGATGAAGG GCGCGGTGAA CCAGCGCGTG
TTCGACGTGC CCGCCACCGG CTCTTTCGTG CTTACCGACT GGCGCGACCA GATCGAGAAC
CTGTTCGAGC CGGGGAGCGA AGTGGTCTGC TACGCAGAGC CGGAAGAAGC CGACGACCTG
CTGCGCCGCT ACCTGGACCA CCCGGAAGAT CGTGCCCGCG TGGTGGCCGC CGCGCGCAGG
CGCATTCTGG CCGAGCACAC CTACGAGCAC CGCCTGCGCA CGCTGCTGGA CCACATGCGC
CGCATCTTCG GCCCGGCCCG CGCCAGATAG
|
|---|
| Protein sequence | MPPVDDTPRQ TAPRPGLAAR VLPLSCPQGM GAAPASSSPV GSDATPAPFC DIEVTVDGRT
MTMLGSGGPA RELALLAPYE KLRADAGADA ARSGTPGGPD TTVPPVSPVP PIPPVLPVLL
GAGTGVALDR LLELHPGPVA VVDRSTEILA ASRLRERHAE DTAAGRILWV TDDDADAALR
TLTRWQYEHG GLQLLPLPHP FYLRLDRAHY ARLRDVLSAS ARFNFWERAA YPKFADPAAL
PRMLLITSQY FLMGEIVTAC QRLGVPYHLL TLDDDEVGQG EFVEKLLRAV VEFRPDFAFT
INHLGVDREG VLTDLLEKLR LPLASWFVDN PHLILYLYRR IVSPWTAIFT WDADNLPSLR
GLGFEHVAYL PLGTDPVRFA PPASPPPASH PWRARVSFVG NSMVYKVAHR MKAGMLPAAL
LRSYREVAAG FGAHGERSVG AYLRAHQPEL ADVYERLGGL DARNGRDAMG DAERRLSYET
MLTWEATRQY RAACVARTLP FAPLIVGDKG WRKVFRNAPA GWRLHPEINY YKELPAFYPL
SEINFNCTSK QMKGAVNQRV FDVPATGSFV LTDWRDQIEN LFEPGSEVVC YAEPEEADDL
LRRYLDHPED RARVVAAARR RILAEHTYEH RLRTLLDHMR RIFGPARAR
|
|---|
| |