Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0247 |
Symbol | |
ID | 7172127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 280410 |
End bp | 281201 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643538742 |
Product | flagellar hook capping protein |
Protein accession | YP_002434672 |
Protein GI | 218885351 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 0.00661658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGCCA GCCCCGTACT CGGTCAGGCC GAGCAGACGT TCAACAACTA CCTTGGCGCC AAGACCAAGA ACGATGAACT GGACAAGCAG GCGTTCCTGA ACCTGCTGGT GGCCCAGCTT AGCCATCAGG ATCCGCTGAA CCCCATGGAC GACAAGGAAT TCGTCGCCCA GTTGGCGCAG TTCACCAGCC TTGAACAACT CACCAACATC TCCACCGGCA TCACCGACCT GAACGCCAGC GCCAAGCAGC AGCAGATGTC CGCCGCAGTG GGCTACATCG GCAAGGAAGT GACCGCCAGC GGCTACGAGA TCAGCAAGAC CTCGCAGAAG GACAGCACCG GCGCGACGGT CAACTCCGTC AGCACGGTGT ACTTCACGAC GCAGGAACAG GTGAGCAACG GCTACATCAA CATCTACGAC AGCCAAATGA ACCTGGTGCG CACGGAACTG ATGGGCGCGA AGCAGCCCGG CACCTACCAG TACAAGTGGG ACGGCAAGGA TTACCAGGGC ACCATAGTTC CGGACGGTGT CTACGCGGTT GCCATGTACG GCGAAGGTAC GGACGGCAAG TCCGTGTACA TCACCACCCA GGTTTCCGGC CAGGTGTCGG GCGTGGTCAA GGTGGACGAC GAACCCTACC TGAGCCTGGC GGACGGCCGC CACATAGCCT TCAGCAACGT CTCCGAAATC GTGGCGCCCA ACACCAACAC CGGCGGCAGC GACACGGAAG ACGACAATTC CGGAGATGAT TCCGGAGATG ATTCCGGCAG CGGCACGGAA GGCGACAGCT AA
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Protein sequence | MAASPVLGQA EQTFNNYLGA KTKNDELDKQ AFLNLLVAQL SHQDPLNPMD DKEFVAQLAQ FTSLEQLTNI STGITDLNAS AKQQQMSAAV GYIGKEVTAS GYEISKTSQK DSTGATVNSV STVYFTTQEQ VSNGYINIYD SQMNLVRTEL MGAKQPGTYQ YKWDGKDYQG TIVPDGVYAV AMYGEGTDGK SVYITTQVSG QVSGVVKVDD EPYLSLADGR HIAFSNVSEI VAPNTNTGGS DTEDDNSGDD SGDDSGSGTE GDS
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