| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0171 |
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| Symbol | |
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| ID | 7172047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 187304 |
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| End bp | 188914 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538665 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002434599 |
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| Protein GI | 218885278 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.000341552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACATAC AGTTTCTGGG AGCCGCGCAG ACCGTCACCG GCTCGTGCTA CATGCTGGAA
GCCAACGGCA CCCGCTTCGC CATCGATTGC GGCATGCACC AGGGCAACTC CGAAATCGAA
AAGCGCAACG TCGATACGGA CATTTACCGC CCCGGCGACA TCGCCTTCTT TCTCGTCACC
CACGCGCACA TCGACCACAC CGGCCTTCTG CCGCGCATGA CGCGCGAAGG CTTCAAGGGC
GACATCTACT GCACCCCGCC CACGCGCGAC CTGATGGACA TCATGTTGCA GGATTCCGCG
CACATCCAGG AAATGGAAGC AGAGTGGGAA ACCCGCAAGC AAAGCCGCTT CGGCAGGCGC
AAGCCGGTGG AGCCCCTGTA CACCATGGCC GACGCCCAGA ACGCCGTGCG CAGGCTGCGC
CCCGTGGAGT ACAACGCCCC GTTCGAGCCC GCGCCGGGCA TCCGCGTTAC CTACAAGGAC
GCGGGGCACA TTCTGGGGTC CGCGTTCCTT GAAATAGAGG TGACGGAAAA CGGCACCCCC
ACGCGGCTGG TGTTTTCCGG CGACCTGGGA CGGCCCAACC AGCTCATCGT CAACGACCCC
GACCATCCCG CCCGGCCCGA CTACCTGTTC ATGGAGTCCA CCTACGGCGA CCGCGACCAC
AAGAATTCCG AAAACAGCCG CGCCGAACTG GCGGAAGCCA TCGCCTACAG CCACGGCCAC
GGCGAAAAGG TGATCATTCC CGCCTTTGCG GTGGAACGCA CCCAGCAGGT GCTGTACACC
CTGCACATGC TGTGGCAGGA GGGCAAGCTG CCCGCCGACA TGCCGGTGTA CATCGACAGC
CCGCTGGCCA TCCGCGCCAC GGAAATCTTC CGCAAGCACC CGCGCTTCTA CGATGACGAC
CTGAAGGCCG CCTACGCGCG CGGCGAAGAC CCGCTGTCCC TGCCCAACCT GCGCTACACC
CTGAGCAGCC AGGAATCGCA GGCGCTCAAC GGCATGAAGG GTTCGGCGGT GATCATTTCC
GCCAGCGGCA TGTGCAACGC CGGACGCATC AAGCACCACC TGCGCCACAA CCTGTGGCGG
CAGGGGGCGT CCATCGTGTT CGTGGGCTAT CAGGGCGTGG GCACGCCGGG CCGCAAGATC
GTGGACGGCG CCCAGACCCT TCGCCTGTTC AACGAAGACG TGGCGGTGAA CGCCAAGGTG
TTCACCATCG GCGGCTTTTC GGCCCATGCC GGGCAAAGCC ACCTGCTCGA CTGGGTGGGG
GCCTTCCAGC ACAAGGACAT GGAAGTGTTT CTGGTGCATG GCGAAGAAAA GGCCCAGGTC
ACCCTTTCGG AAAAGCTGCA CGAGCGCTAC GGTCTTACCG TGCACGTGCC CACCTACATG
GAAGAGGTGA CGCTGAAGCC GGGCCGCACC ATGCTGACCG CGCCCGACGA AAGCCGCGCC
CACCCGCGGG TGGACTGGGA ATTCCTGCTG GGCGACACCG AGGCCAAGGT GGCCATGCTG
CGCCAGCGTC TGGCCGGGGT GGAAACCCGC CCCTGGGTGG AACAGGTGGA CATCCGCGAC
CGGGTGGCCG ACCTGAACCG GGAGATACTG AGCCTGTTGT CGCAGGTGTA G
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| Protein sequence | MNIQFLGAAQ TVTGSCYMLE ANGTRFAIDC GMHQGNSEIE KRNVDTDIYR PGDIAFFLVT
HAHIDHTGLL PRMTREGFKG DIYCTPPTRD LMDIMLQDSA HIQEMEAEWE TRKQSRFGRR
KPVEPLYTMA DAQNAVRRLR PVEYNAPFEP APGIRVTYKD AGHILGSAFL EIEVTENGTP
TRLVFSGDLG RPNQLIVNDP DHPARPDYLF MESTYGDRDH KNSENSRAEL AEAIAYSHGH
GEKVIIPAFA VERTQQVLYT LHMLWQEGKL PADMPVYIDS PLAIRATEIF RKHPRFYDDD
LKAAYARGED PLSLPNLRYT LSSQESQALN GMKGSAVIIS ASGMCNAGRI KHHLRHNLWR
QGASIVFVGY QGVGTPGRKI VDGAQTLRLF NEDVAVNAKV FTIGGFSAHA GQSHLLDWVG
AFQHKDMEVF LVHGEEKAQV TLSEKLHERY GLTVHVPTYM EEVTLKPGRT MLTAPDESRA
HPRVDWEFLL GDTEAKVAML RQRLAGVETR PWVEQVDIRD RVADLNREIL SLLSQV
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