Gene DvMF_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0140 
Symbol 
ID7172015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp156372 
End bp157253 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content70% 
IMG OID643538634 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002434569 
Protein GI218885248 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.248818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGC GTCCCAAGGC GCTGGTGCTC GGCGGCAGGA CCGGGCTGCT CGGCCAGGCC 
CTGGTGCGCG TGCTGCGCGA ATCGGGCTGG GACGCCCTGC CCACCGGGCG GGACGACGTG 
AACGTGCTCG ATTCCGGGGC GCTGGCCTCG TTCATCGAGC GCGCCGAACC CGCCGTGATC 
TTCAACACCG TGGCCTGGAC CCAGGTGGAC CTGGCCGAAG AGCGCGAGGA AGACGCCACC 
CGCCTCAACC GGCAACTGCC CACCTGCCTT GCACGCATGG TGCGCGGCAC GCCCATGCAC 
CTCGTGCACT TCAGCACCGA TTTCGTCTTC AGCGGCAGGA AGGGCACGCC CTACACGCCG 
GAAGACACGC CAGACCCCGC GTCCGTCTAC GGCGCCACCA AGCTGGCCGG TGAACAGGCC 
GTGCTGCAAC AGTGCCCGGA CAACGCCTGC GTGGTGCGCA CCTCGTGGCT GTTCGGGCCG 
GGGCGCCGCA ATTTCGTCAA GGTCATCCTG GACATCTGCC ACGACAAGGG CGAGGCCCGC 
GTGGTGCACG ACCAGATCGG CTCGCCCACC TACACCCTGG ACCTGGCGGC GGGCAGCGTG 
AAGCTGGCCG AACTGCGGGC CACCGGCATC TTCCACGTGG CCAATGCCGG GCAGGCCAGT 
TGGTGCGAAC TGGCGTCCGA GGCGGTGAAC CTGGCCGGGC TGCCCTGCAA GGTGCACGCG 
ATACCCTCGC GTGATTACCC GCAAAAGGCC CAGCGCCCGC CCTTTTCGGT GCTGGACACC 
GCGCGCTTCA CCCAGATGAC CGGCATCACC CCGCGCCCGT GGCCGCAGGC CCTGCGCGAC 
TACATCTACA AGGAATGCCT GCCCGGCACG CACGACGCCT GA
 
Protein sequence
MSPRPKALVL GGRTGLLGQA LVRVLRESGW DALPTGRDDV NVLDSGALAS FIERAEPAVI 
FNTVAWTQVD LAEEREEDAT RLNRQLPTCL ARMVRGTPMH LVHFSTDFVF SGRKGTPYTP 
EDTPDPASVY GATKLAGEQA VLQQCPDNAC VVRTSWLFGP GRRNFVKVIL DICHDKGEAR 
VVHDQIGSPT YTLDLAAGSV KLAELRATGI FHVANAGQAS WCELASEAVN LAGLPCKVHA 
IPSRDYPQKA QRPPFSVLDT ARFTQMTGIT PRPWPQALRD YIYKECLPGT HDA