| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0024 |
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| Symbol | |
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| ID | 7171896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 29953 |
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| End bp | 31272 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643538516 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002434454 |
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| Protein GI | 218885133 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.0263374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAG CAAAGAACCG GCTGGGCATC ATCTTCTTTC CGGCCTTCGA CTGGGCCATC
AGCGCCACCC ACCCGGAACG CGAGGAGCGG CTGCTCTACA CGCAGGACCA ACTGCGCGAG
GAAGGGCTGT TCGACATCGC GGGCATCACC GAATACAAGC CGGAAATCGC CACCCGCGAA
GACGTGGAGC GCGTGCACTT CTGCATCCCC GGCGTGGAGA GCGTGTGCAC CAAGTCGCAC
CTCATTTCCG CCGGGGGGGC CATTACCGCC GCCCGGCTGG TGATGGAGAA GGAAGAGGAA
AAGGCCTTCG CGCTGGTGCG CCCGCCGGGG CACCACGCCA TGAAGGTGGT GCACGGCAAC
CGGGGGTTCT GCAACATCAA CATCGAAGCC GTGATGCTCG AACACATCCG CGAGCACTAC
GGCCCGTTGC GCGTGGCCAT CGTGGACACC GACTGCCACC ATGGCGACGG CACGCAGGAC
ATCTACTGGA ACGACCGCGA CACCCTGTTC ATCTCGTTGC ATCAGGATGG CCGCACCCTG
TACCCCGGCA CCGGCTTTCC GCATGAACTG GGCGGCCCCA ACGCCATGGG TCGTACCCTG
AACATCCCGC TGCCGCCCGG CACGTCGGAC AAGGGCTTCC TGCACGTCAT CGACAACCTA
GTGCTGCCGG TGCTGGAAGA CTTCAAGCCG GACCTGATCA TCAACTCCGC CGGGCAGGAC
AACCACTTTT CCGACCCCAT CACCAACATG AACTTCTCGG CGCGGGGCTA CGCCATGCTG
AACAGGCGGC TGAACCCCGA CATAGCCGTG CTGGAAGGCG GCTACGCCAT CCAGGGCGCG
CTGCCGTACG TCAACCTGGG TATCTGCCTG GCCATGGCCG GGCTGGACTT CGACGGGGTG
CGCGAGCCGG AATTCGATCC GGCGGCCATT GCCCAGTCGG ACCAGGTGAC CGCGTACATC
GAGCGGCTGT GCGACGAGAT GCTGAAGGTT TGGCGCAAGC CCCCGGCCCT GCCCAAGCAG
GGCGAACGCT CCGGCGACTG GTGGGTGCGC ACCAAGGACA TCTACTACGA TACCGATGGC
ATCAGCGAGA GCCAGGTGGA GTCGGTGCTG CTGTGCCCGG ACTGCTCGGG CACGGTGAAG
ATAGAAACCT GGTCCACGGT GAATCCGCTC AGCGTGGGCA TCGAAATTCC CATCAGCGCC
TGCGACAGAT GCGCGGGCAT TGGCCGCCGC CTGCTGGAGG AAGCCCACCT GAAGGGCAAC
TACCGCTACG TGCAGTGCAT CGATAGAAAA GCAAAAAAAT ACACCCGCTA CGGGTTTTAG
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| Protein sequence | MLEAKNRLGI IFFPAFDWAI SATHPEREER LLYTQDQLRE EGLFDIAGIT EYKPEIATRE
DVERVHFCIP GVESVCTKSH LISAGGAITA ARLVMEKEEE KAFALVRPPG HHAMKVVHGN
RGFCNINIEA VMLEHIREHY GPLRVAIVDT DCHHGDGTQD IYWNDRDTLF ISLHQDGRTL
YPGTGFPHEL GGPNAMGRTL NIPLPPGTSD KGFLHVIDNL VLPVLEDFKP DLIINSAGQD
NHFSDPITNM NFSARGYAML NRRLNPDIAV LEGGYAIQGA LPYVNLGICL AMAGLDFDGV
REPEFDPAAI AQSDQVTAYI ERLCDEMLKV WRKPPALPKQ GERSGDWWVR TKDIYYDTDG
ISESQVESVL LCPDCSGTVK IETWSTVNPL SVGIEIPISA CDRCAGIGRR LLEEAHLKGN
YRYVQCIDRK AKKYTRYGF
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