Gene AFE_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3227 
Symbol 
ID7136997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp2905800 
End bp2906462 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID643531571 
Producthypothetical protein 
Protein accessionYP_002427582 
Protein GI218668097 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTGGC TGCTTTTGGG GTTGCCGGGC CTGGCTGTGG CGAAGGTGCC GACGCTGGCC 
CTCACCAGCG TCCATTTCCA GGTGATGACA CATTATCGGG CGCCCAGGAC GGTATTGCAT 
GCCGACCTGC AGGCGGAGGC ATCGGGGAGA AGCCCGGCGA AGTTGGCCGC CATGGTCAAT 
CAGGACGTGT CCTGGGCAAA AGCCCGGCTG CAATCGGTGC CTGGGATTAC CTGGCGTAGC 
GCCGGGTACC AGACGCAGGC GACAGGCCAG ACCGATGCAC CCTGGCTGGT ACGGGAAGAT 
CTGGCCGTGC AAAGCCCGGA TCCGGCGGTG TTGCTCCCCT TGCTGGGCAC GCTGCAATCC 
CGGTTACACT TGGTCGGGAT GCAGTATGCA GCACCTTCCG TCGCTATACA CAAGGCGCTG 
AGAACGGCCG AGCTGCGGGG ACTGCGCCGG TACCGGAAAC AAGCACAGCA GAATTGCACG 
GCGCTGGGCT ACCATGGCGC GCGTCTGGGG CAGGTATTCA TCAATACGAA TGTCGTCCCA 
TTGGCGCGGC CGATGCCAGT CATGGCGTTA GCCGCCAAGG TCGTCCCTGG GCCCGTAGTC 
GGCCGGGGCG GGACGGAAAG GGGCAGGGTA GTGGTTGAAG GAAATGCTTA TTGCGAGAGG 
TGA
 
Protein sequence
MLWLLLGLPG LAVAKVPTLA LTSVHFQVMT HYRAPRTVLH ADLQAEASGR SPAKLAAMVN 
QDVSWAKARL QSVPGITWRS AGYQTQATGQ TDAPWLVRED LAVQSPDPAV LLPLLGTLQS 
RLHLVGMQYA APSVAIHKAL RTAELRGLRR YRKQAQQNCT ALGYHGARLG QVFINTNVVP 
LARPMPVMAL AAKVVPGPVV GRGGTERGRV VVEGNAYCER