Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_3196 |
Symbol | tnsD-2 |
ID | 7134239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2876122 |
End bp | 2877951 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643531541 |
Product | Tn5468, transposition protein D |
Protein accession | YP_002427552 |
Protein GI | 218667113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.480542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTGGCCT ATTTCCCGGA AATTTATCCC GACGAACTGT TATACAGCGC GCTTGCGCGT TATCATCGCC ACGTTTGTTC CAGAAGCCCG AAACACACCC TGTATGATCT CTTTGGTGAA ACCGGGGTGC GGGCGACGGT GGGCTTGCAA AGCCATGTGG CGGCGTTGAG CCAAAGAATA CCGGCCGATC GCGGACTCAG TCCGGAAAGA CTGACCAGGG ATTTTACCCT CTACCGTTAT TACACGGCAT TCGAGCCGAA GTCAGTGGGA CAATCCGTAC TGGCGTCATT AGCGGACGGC CCGGCGGATG CCGTGCATGT GCGTCTGGGT ATTGCGGCGA GCGCGATTTC GGCTCCGGCA TACTTACGGT ATTGTCCCAT CTGCTTTGGC GAGATGTTGA GCCGCTATGG AGAAGGATAT TGGAGGCGCA GCCATCAACT CCCCGGCGTT CTGGTTTGTC CAGATCATGG CGCGGCCCTG GCGGACAGTG CGGTCTCTCA AGGTGGCAGT AACCAGCACG AATTCATCGC CGCGGATCAA AAGAACTGTT CGCCTGTGGC GGCACTCCCT TCTTGGGCGA GTAGCCCGCG CCAAGTGACG CTGTTGCAAG AGATTGCCAA GCGGAGCGCG GCGTTGCTCG ATCATCCGCC AGCGCGCCCC AGCTTTCGCG ATTGGAGTGC ATATTATCGG AGCGCAGTGA TTGATCGCGG CTTCGGCAAA GGCAAGGAGA ATGTCGCTCA GAACCTTCTC AGGGAAGCAA TTTCAAGCCT GTTTGAACCA GTAATCGACC TTATCCCCGG TGGTCTCGGC GACGATTGGC CTACGGCCAT GGTACGGAAA CACAGAAAGG CATTTCATCC GTTGCGGCAT GTTCTATTCC AGATTTTTCT GGACAAACGG TCGCCGCAAC GGCGGACGGA AACCCCCTTC GGCAAGGGAC CGTGGCCCTG CTTTAATCGT CTGGCAGACC ATTATGGGCA AGACGTGATC TACGAGATCG CTGTTCGCCA TGAACAGAAT CGGGTGATTG GTCGATTTTC CTGCGCCTGC GGATTTGTGT ACAGTCGAGA GGTGGGATCA AGGAGTTCGC CGCGCATTTT GGACTTTGGT CCCCTACTGG ATGGTCAAAT CCGGCAGAAA GTGGCGGAAG GCCTGGGACT CAGGGCGGTA GCCAAATATC TTGCCATTGA TCCAGGGACG GTGAGATTGC ACGCCTCCCG ACGCGGGTTG AATGTGCCCT GGAAGCCCTT AGCCGCACGA CATTCCCGAA CATTGGTGCC AGACCGGGAT GCCATAAGAA TACGGTGGTT GGACATGCAG CAGAATTACG CTGATTTATC ACGTCGGCGA CTGGCACTCC TGCTACCCAA AGAACACTCA TGGTTGTACC GCCATGACAG GGAGTGGCTG GAGCAACATT CACCAACGGC ACTGCACAAG AAATGGTCTG ATCAGCGTGT GGACTGGGAG ACATTGGATC GTAGCATGGC GATCCAACTG CGTAAGGCCG CGCGGGAAAT CACTCGGGAG GTTCCGCCAC AACGCGTTAC CCAGGCGGCT TTGGAGCGCA AGTTGGGGCG GCCACTCCGG ATGTCAGAAC AACAGGCAAA ACTGCCTAAA AGTATCGGTG TACTTGGCGA GGTCACGGAG ACTATTGATG CGTTTCGCCT GCGCCGTATT GCTTGGGCTG TCTCGGAATT GGATCGCCAG GCGTTGCCTT TGCGATCGTG GCGGGTACGC CGCTTAGCAG GGCTGCCTTC GATAGCTTCA CCGAGCGTAG AAACCGCCTT GGCCGCATTG GAAATAATGG CTGGATCCTT TGAGGTATAA
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Protein sequence | MLAYFPEIYP DELLYSALAR YHRHVCSRSP KHTLYDLFGE TGVRATVGLQ SHVAALSQRI PADRGLSPER LTRDFTLYRY YTAFEPKSVG QSVLASLADG PADAVHVRLG IAASAISAPA YLRYCPICFG EMLSRYGEGY WRRSHQLPGV LVCPDHGAAL ADSAVSQGGS NQHEFIAADQ KNCSPVAALP SWASSPRQVT LLQEIAKRSA ALLDHPPARP SFRDWSAYYR SAVIDRGFGK GKENVAQNLL REAISSLFEP VIDLIPGGLG DDWPTAMVRK HRKAFHPLRH VLFQIFLDKR SPQRRTETPF GKGPWPCFNR LADHYGQDVI YEIAVRHEQN RVIGRFSCAC GFVYSREVGS RSSPRILDFG PLLDGQIRQK VAEGLGLRAV AKYLAIDPGT VRLHASRRGL NVPWKPLAAR HSRTLVPDRD AIRIRWLDMQ QNYADLSRRR LALLLPKEHS WLYRHDREWL EQHSPTALHK KWSDQRVDWE TLDRSMAIQL RKAAREITRE VPPQRVTQAA LERKLGRPLR MSEQQAKLPK SIGVLGEVTE TIDAFRLRRI AWAVSELDRQ ALPLRSWRVR RLAGLPSIAS PSVETALAAL EIMAGSFEV
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