Gene AFE_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3028 
Symbol 
ID7135822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp2719917 
End bp2720486 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID643531379 
Producthypothetical protein 
Protein accessionYP_002427395 
Protein GI218666614 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCA AGGTGATGCC GCGACTCCGT ACCCCGGGGC TGGGCATCTC TCTGCTGCTG 
CTGGTTCTCA CGGCGCTGGT GTGGTGGTCC TGGCCGCAGC ATCCCATATC CCTGCCGCAG 
ATCGACTGGC ATGGACAAAT CCATAAGGGA GACCAGGCCG CCGAAGATGT GGTGATGCGC 
CAGTACACGG CGGCCGGAAA CCTGGATTTG CTGGCCACTG CCCAGGCGGC CTATCATGTG 
CCGGGCGTCG ATCAGACCGT GCTCAGCCAG GTTGCCGTCG AGCGGTTCAA ACCCGGACAG 
CAGACGCATC TGCGTGCCGA CCAGGGTCTG GTCGATGATC GCAGCCAGCG GATTACCTTA 
TGGGGGAATG TGGTTGGCAC CTTGCAACCA GACACCCGAC TGCTCACCGA AAGGGTGTAC 
TATGATCCGC AGACGGGCAT CATTACGTCG CCGGAGCCGG TCCGCCTGGA GCGGGGGCGG 
GACTGGATGA CCGGGGTGGG GCTCCGGGCT TCGGTAAAAA CCCAAGAGGT GGACATCTTG 
CATGAGGTAC GCGGTGCGTA TATTCCTTAA
 
Protein sequence
MPRKVMPRLR TPGLGISLLL LVLTALVWWS WPQHPISLPQ IDWHGQIHKG DQAAEDVVMR 
QYTAAGNLDL LATAQAAYHV PGVDQTVLSQ VAVERFKPGQ QTHLRADQGL VDDRSQRITL 
WGNVVGTLQP DTRLLTERVY YDPQTGIITS PEPVRLERGR DWMTGVGLRA SVKTQEVDIL 
HEVRGAYIP