Gene AFE_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2829 
Symbol 
ID7135661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2511765 
End bp2512574 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID643531182 
Producthypothetical protein 
Protein accessionYP_002427199 
Protein GI218666982 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.866049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGAATG TGCTGGTTTT CGACATCGAG ACGGTGCCCG ACGTTGCCGG CGGGCGGCGG 
ACGCATGGCA TTGAACTGGC GGACGACGCG GGCGTGGCGG AATTGCTGCA GCACCAGCGT
CGCATCGAAA CCCAGGGCGC AACGGAGTTT CTGCGCCCCT ATCTGCACCG GGTAGTCGCT
ATTTCCGCCC TCTGGTGGCA GGGCGGACAG GTCAAGCTCA GCAGTTTCGG CAAGGTGGAC
GACGACGAGG CCGCTCTGGT CACGGCCTTT TTCCAGTTCA TTCAGCGCCA TGCCCCGCAA
CTGGTATCCT GGAATGGCGC GGCCTTTGAC CTCCCGGTGC TGCATTATCG GGCCCTGCTC
CACGGCATTC CTGCCGCCCG CTACTGGGAG CACGGCGAAC AGGACCAGAA CTATCGCTGG
AACAATTACA CCAGCCGTTA CCACGAGCGC CATCTCGACC TCATGGATGT CCTCTCCGCC
TATCAGGCGC GCAATGTCGC CCGTCTCCAG GACATCGCGT TGCTGCTGGG GCTGCCCGGC
AAGCTGGGAA TGAGCGGTGC GGAGGTCTGG ACCCATTATC AGGCAGGGGA GCTGGCGGGC
ATTCGCCACT ACTGCGAAGT CGATGTGCTC AACACGGCCC TGGTCCACCT GCGTTTTGAA
CTGACCCGCG GGCATCTCGA CAGATCGGCT TATGATGTTT GCCAGACCCG GTTGCGGTCT
TACCTGCAAG GCCGGGACGA GGCCCACGTC CAGGAATTTC TCACCCTGTG GCCAGAGAAT
CTGCATGTCG CGTCCCAAGC CCATTCATAA
 
Protein sequence
MQNVLVFDIE TVPDVAGGRR THGIELADDA GVAELLQHQR RIETQGATEF LRPYLHRVVA 
ISALWWQGGQ VKLSSFGKVD DDEAALVTAF FQFIQRHAPQ LVSWNGAAFD LPVLHYRALL
HGIPAARYWE HGEQDQNYRW NNYTSRYHER HLDLMDVLSA YQARNVARLQ DIALLLGLPG
KLGMSGAEVW THYQAGELAG IRHYCEVDVL NTALVHLRFE LTRGHLDRSA YDVCQTRLRS
YLQGRDEAHV QEFLTLWPEN LHVASQAHS