Gene AFE_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2320 
Symbolorn 
ID7135715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp2066964 
End bp2067548 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content58% 
IMG OID643530685 
Productoligoribonuclease Orn 
Protein accessionYP_002426714 
Protein GI218665313 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCCA AAGCACACCG CCTCATCTGG ATCGATCTGG AGATGACAGG TCTGCATCCG 
GGACAGGATC AGATTCTGGA AATCGCCACG CTGGTCACGG ACGATAGTCT GCGGATTCTC 
TGCGAAGGCC CGGTACTGGC CGTCCATCAA CCCGAATTCG TGCTCGCGGC GCTGGATGAC 
TGGAACCAGC GTACCCACAG TACTTCGGGC CTCCTGCAGC GGGTCCGCGA CAGCCGCCTG 
GATATGGCCG CCGCAGAAAC CCAAACTCTG GACTTCCTGC ACCAGCATGT TACCACCGGC 
ACATCACCGA TGTGCGGCAA CAGCGTATGT CAGGATCGCC GATTTTTAGC CCGCCTGATG 
CCGCGGCTGG AACGTTTTTT TCACTATCGG ATGATCGATG TGAGCACCGT CAAGGAACTC 
GCCACCCGCT GGTATCCGCA CCTACCCAAA TTTTCCAAGG CCGAGCGCCA CGAAGCGCTG 
GCCGATATTC GCGAATCTGT TGCCGAACTC GCTTATTATC GCGAACGACT TTTCCCGCAG 
ACACCTTTTC CAGGCTCTGG GGCTGGAAAC TCCGCAACTG AATAG
 
Protein sequence
MDPKAHRLIW IDLEMTGLHP GQDQILEIAT LVTDDSLRIL CEGPVLAVHQ PEFVLAALDD 
WNQRTHSTSG LLQRVRDSRL DMAAAETQTL DFLHQHVTTG TSPMCGNSVC QDRRFLARLM 
PRLERFFHYR MIDVSTVKEL ATRWYPHLPK FSKAERHEAL ADIRESVAEL AYYRERLFPQ 
TPFPGSGAGN SATE