Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2224 |
Symbol | |
ID | 7137239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1976273 |
End bp | 1978633 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643530592 |
Product | glycosyl hydrolase, family 15 |
Protein accession | YP_002426622 |
Protein GI | 218666451 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTAACC CAAGCAAAGC GCCCGCTGCC GCTTGGCGCC ACCCCGTCTG GTCCACCGCC CGGAAATCCT GCGTGGGCAC GGCGCTGGGC AGCGGAAAAA TCTGGTTTAC CACGGGCCGG GGGATTGTCA CCGAAGTCTT TTACCCGCGT ATCGACATCC CTCAGATTCG CGACCTCGGC TTCATCGTTG CCGATGATCA GGGGTTCTGG CAGGAACTGA AGGCCCTGCC AGAACCCCGA CTGGAAATGG AGGACCCCCT CGTTCCTCTG CCCATCATCC ACCATCATCA CGACCGCTTC GACTTCACCC TGAAAATCTG CGCAGACCCG GAACGGGATG TGCTCCTGCT CGACTTCCAT CTGGAGGGCG ATGCCGCGCT GCGGCCTTAT CTGCTCTGCT CCGCACGTCT CGGTGAGGAT GCCGAAAACA ACTGCGCGTG GGTAGGTGAT TGGGAAGGCC GGCCAGTACT CTGGGCAGAA CAGGGACCTT TTGGCCTGGC GCTCACCTGC CGCAACGCCG ACGGCTATCC GGCACTGGAA CGCTGCACGG TGGGCGAAGT GGGTGCCAGT GATCTCTGGC AGGATTTTCA TCAGAACGGA CGGATGCAGT GGGCATATCA GGAGGCCGGA CCAGGTGAGG TGGCCTTGGC GGGTCGTCTG CCACGGCAGG GCACCCTGGC CCTGGGTCTT GGCACCAGCA AGGAAGCCGC CGCCACCAAC GCCTGGTCCT CCCTGGCCGA GGGCTTTCAG AGCCGCGCGG CGGATTACAG CGCCGGCTGG AATGCCTGGC ACCAACGCCA TCCCACCCAC CACTGTGTCA GCAAACTGCC GGCGGCGGCT AAAGCCCTGT ACGCTCGCTC CACCAACATT CTCAAGGTAC ATGAGGATCG TACCTTCCCC GGCGCGATGG TGGCCAGTCT CTCGGTGCCC TGGGGGGAGT CCAGCGACAG TCGCGGCGGC TATCATCTGG TTTGGTCCCG AGATCTGGTG GAGAGCGCAG GGGCCCTGCT CGCCCTCGGG GCCGCCACCG AAGCACGACA CGTACTGACC TATCTCATCA GCACCCAACA GGCCGACGGG CACTGGTTAC AGAATCAATG GCTGGGCGGC AAACCCTTCT GGCAAGGGGT GCAGCTCGAT GAAACGGGAT TCCCGGTGCT CCTCGCCTCG GCATTGCGCG AGGCGCAGAT GCTGGAGAAC GTAGCGGTCA CCGACATGAT CACCCGTGCC TTGCACTTTA TCGTCCACGA GGGGCCGGTG ACTGGGCAGG ACCGCTGGGA GGAAGATGGC GGCGTCAATC TGTTCACCCT CGCAGTGGCC ATCGCCGCGC TGGTGGAGGG TGCCGGCTTC CTGGGCGGCA AGGCCGGTGA CTGTGCCCTG ATGCTGGCCG ATTACTGGAA TGCACGACTG GAGGAATGGA CCTTTGCGCA CGATACCGAC CTTGCCAGAC GCTTTCAGGT AGCCGGCCAC TACGTCCGCA TCATCCCGGA GGATATCCTG GTGCAGGATG GCGCCCAGAA GGAGTGGGTA CTGATCAAGA ACCGGGCTCA TGATCCGCAC TTGTCCGCTG GCGAACAGGT CGCCAACGAC TTCCTGCAAC TGGTGCGTTA CGGTCTGCGC AGCGCGGACG ATCCGCACGT CACCGCCTCG GTCAAAGTCA TGGATGGACT GCTCCGAACA GACACTCCCT GCGGCCCGGT CTGGCACCGC TACAATGGCG ACGGTTACGG GGAACATGCC GATGGCAGCC CCTTTGACGG TACCGGCATC GGTCGTGGCT GGCCTTTGCT GGTAGGGGAA CGGGGTCATT ACGCCCTCGC CGCTGGCGAA GACGCCGTGC CCTACATCAA CGCCATGGCG GCCATGACAG GCAACAGTGG ACTACTGCCG GAACAGATCT GGGAGTCCGA CGCCATACCG GAGAAGGGCC TGTTCCCCGG CCACCCCAGC GGCTCGGCCA TGCCCTTGGT CTGGGCCCAC GGTGAGTTCA TCAAGCTGTG CCACAGCGCT GCGCAGGGCC GTCCCGTGGA CCGCCCGGCG CAGACCTGGA AGCGCTATCA GGGCAAAGTC CCGAAGATCG ACTACCGGAT CTGGCGTCTG CGCCAGCGGC CGCGTCAACT GCCCGCAGGA CAGGAACTGC GGCTGTTGTT GCGGGCGCCT TTCACCGTAC ACTGGGGCAG CAACGGCTGG CAGGCGATAC AGGATACCGA GTCGGAAGAC TGGGGTCTCG GCCATGTCGC TACCCTGCCG GTACAGAAAT TGCGGGTCGG GGACAGCGTA CAGTTCACCA TCCTCTGGCG CGACAGCGGC GACTGGCAGG GCGAGGATTT TCATATCGAT ATTGTCGGAG GTGGCGCATG A
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Protein sequence | MGNPSKAPAA AWRHPVWSTA RKSCVGTALG SGKIWFTTGR GIVTEVFYPR IDIPQIRDLG FIVADDQGFW QELKALPEPR LEMEDPLVPL PIIHHHHDRF DFTLKICADP ERDVLLLDFH LEGDAALRPY LLCSARLGED AENNCAWVGD WEGRPVLWAE QGPFGLALTC RNADGYPALE RCTVGEVGAS DLWQDFHQNG RMQWAYQEAG PGEVALAGRL PRQGTLALGL GTSKEAAATN AWSSLAEGFQ SRAADYSAGW NAWHQRHPTH HCVSKLPAAA KALYARSTNI LKVHEDRTFP GAMVASLSVP WGESSDSRGG YHLVWSRDLV ESAGALLALG AATEARHVLT YLISTQQADG HWLQNQWLGG KPFWQGVQLD ETGFPVLLAS ALREAQMLEN VAVTDMITRA LHFIVHEGPV TGQDRWEEDG GVNLFTLAVA IAALVEGAGF LGGKAGDCAL MLADYWNARL EEWTFAHDTD LARRFQVAGH YVRIIPEDIL VQDGAQKEWV LIKNRAHDPH LSAGEQVAND FLQLVRYGLR SADDPHVTAS VKVMDGLLRT DTPCGPVWHR YNGDGYGEHA DGSPFDGTGI GRGWPLLVGE RGHYALAAGE DAVPYINAMA AMTGNSGLLP EQIWESDAIP EKGLFPGHPS GSAMPLVWAH GEFIKLCHSA AQGRPVDRPA QTWKRYQGKV PKIDYRIWRL RQRPRQLPAG QELRLLLRAP FTVHWGSNGW QAIQDTESED WGLGHVATLP VQKLRVGDSV QFTILWRDSG DWQGEDFHID IVGGGA
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