Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2068 |
Symbol | trpA |
ID | 7137039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1817963 |
End bp | 1818781 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643530439 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_002426471 |
Protein GI | 218667802 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.659301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTC TCGCCGGGCT GTTTGTCCAA CTCCGGGATG CGGGTCGCGC CGCCCTCATT CCTTTCATGA CGGCGGGTGA CCCATCCCTG ACCGCGACCG TGCCCCTGAT GCACGCGCTG GTCGCCGCGG GGGCCGATGC CATCGAACTG GGGATGCCCT TTTCCGACCC CATGGCCGAT GGTCCCAGCA TCCAGCGCGC CAGTGAGCGG GCGCTGGCGC GAGGGGTGAA GCTGCGCATG GTCCTGGAGT GGGTGCGCGA ATTCCGCACG ACCAACAGTC ACACGCCCGT CATTCTCATG GGTTATCTGA ATCCGGTGGA AGCCATGGGT ATAACCTCGT TCGCCGAGGC TGCCGCGACG GCGGGGGTGG ACGGTGTCAT TCTGGTGGAT CTGACTCCGG AGGAGGGGCG AGGTGAAGCC GTCGTTCTCC GCCAGCGGGG TATCGATCCC ATTTTCCTGC TGGCGCCGAC CAGCGGGCCG GAACGCGTGG CGACCGTCCG CAGTATGGGC AGTGGTTTTG TATATTATGT ATCTCTGCGC GGTATTACCG GTGCAGCCCA GGCGGACTGG GCGGAAGTTC TGGAGCGGGT ACAGCACCTG CACCGGCAAC TGGGCCTGCC CGTGGCCATC GGTTTTGGCA TTCGCGATGC AGCGACGGTA GCGCGGGTGG CGACCGGGGC CGACGCGGTG GTCGTCGGCA GTGCACTGGT CGATCAACTG GCGGCGTGTG CGACGGATCA GGAAGCCATT GCGGCGGCCA TCCGCTTTGT CGAGCCGCTG GCCCAGGCCG TCCGGAGTAC GGAAAGGAGA GGCGCATGA
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Protein sequence | MSRLAGLFVQ LRDAGRAALI PFMTAGDPSL TATVPLMHAL VAAGADAIEL GMPFSDPMAD GPSIQRASER ALARGVKLRM VLEWVREFRT TNSHTPVILM GYLNPVEAMG ITSFAEAAAT AGVDGVILVD LTPEEGRGEA VVLRQRGIDP IFLLAPTSGP ERVATVRSMG SGFVYYVSLR GITGAAQADW AEVLERVQHL HRQLGLPVAI GFGIRDAATV ARVATGADAV VVGSALVDQL AACATDQEAI AAAIRFVEPL AQAVRSTERR GA
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