Gene AFE_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2052 
Symbol 
ID7136897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1800608 
End bp1801657 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content62% 
IMG OID643530423 
Producthypothetical protein 
Protein accessionYP_002426456 
Protein GI218666702 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCC TCCATAGCCT GCGACGGCCT GGCATTCAGG CCGCTCTTCT GTCGGCACTG 
CTTTTCGGCG CAAGCACACC GCTGGCGAAG ATCCTGCTCG CGTCGATGAG TCCGTGGATG
CTGGCTGGAC TCCTCTATCT GGGCTCAGGT CTGGGCCTGA CGCTCTATCG CTGGTTGCGG
CGCGCCGAAT TCGTGCGGCT AACGCACCGA GATGCCTTCT GGTTTGCCGC TTCGGTAATG
GCCGGAGGGA TCGTGGCGCC GGTGCTGTTC ATGATCGGTT TGCGAGGTGC TGCGGCATCG
ACGGCATCCC TGTTGTTGAA TGCGGAAACC GTGTTTACGA CGCTGCTTGC GTGGTGGGTG
TTCAGGGAAA GTTTTGACCG GCGCATTGCC TGGGGTATGG CAGCGATTGT GCTGGGGATG
ATCCTCCTCA GTTGGCCTGG GCAGGTGCAT CTTGATCATC TCTGGTCCGC TGCCGCCATC
ATCGGCGCCT GCTTCGCCTG GGGTGTGGAT AACAATCTGA CCCGCAAGGT ATCCCTGACG
GATACGAGCT GGATCGCCGC CAATAAGGGC TGGGTGGCGG GCGGCGTCAA TCTCGGCCTG
GCTCTGCTGC TCGGTGACCA TCTGCCCGCC CTGCCCGACC TGGCGGCGGC AATGCTGCTC
GGATTTTTCG CCTATGGCGT CAGCCTCGCC CTGTTCGTGG TCGGCCTGCG CCATCTCGGC
AGTGCGCGGA CCGGAGCGTA TTTTTCCAGC GCGCCCTTTG TCGGTGCCGT ACTCAGCGTG
ATGCTCGGGG CTCCGGTCAG CCCGCTCCTG GTGATCGCCG GAGCGCTGAT GGGCTGGGGC
ATCTGGATGC ATCTCACCGA GCGTCACGAA CATAGCCATA CCCATACCTT TATGGAACAT
GATCATACCC ATGTGCATGG AGCGCATCAC CAGCACACCC ATGCGTTTCC GGTGGCGCCG
GGAGTCCGTC ATCGCCACCC GCACCAGCAC GAGGCGCTGA GCCACAACCA CGCCCACGCG
CCAGACATGC ACCATCTGCA TGACCATTAA
 
Protein sequence
MPRLHSLRRP GIQAALLSAL LFGASTPLAK ILLASMSPWM LAGLLYLGSG LGLTLYRWLR 
RAEFVRLTHR DAFWFAASVM AGGIVAPVLF MIGLRGAAAS TASLLLNAET VFTTLLAWWV
FRESFDRRIA WGMAAIVLGM ILLSWPGQVH LDHLWSAAAI IGACFAWGVD NNLTRKVSLT
DTSWIAANKG WVAGGVNLGL ALLLGDHLPA LPDLAAAMLL GFFAYGVSLA LFVVGLRHLG
SARTGAYFSS APFVGAVLSV MLGAPVSPLL VIAGALMGWG IWMHLTERHE HSHTHTFMEH
DHTHVHGAHH QHTHAFPVAP GVRHRHPHQH EALSHNHAHA PDMHHLHDH