Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2017 |
Symbol | |
ID | 7136008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1762944 |
End bp | 1763678 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643530388 |
Product | PspA/IM30 family |
Protein accession | YP_002426421 |
Protein GI | 218666968 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.373785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATAT TCAAACATGC CGCAGAAATA CTGGAAAGCA AGGTAAACCA TTTTCTCGAT AATGCGGAGG ACCCGGCAGA AACCCTGGAT TTGTCCTACG AGAAAATGAT TGCCAATCTG CAGGATACCA AAAGGCATCT TGCCGATGTG GTGACGGAAC GGATTTCTCT GGAAAACCAG ATGGCCCAGG CCCAAAAGGC GGCGGATAAA GCCGACGCCG ACGCCCGAGT GGCACTGGGC GCCAACCGCG AAGATCTGGC GCGTGCCGAG CTGGCCCAGA AGCAGTCGGA GTTGCAGAAG ATCGCCTCCC TCAAGGAAGC CCATGATACC GTCGCGGCCC AGGCGCAGAA GCTGACGGAC TACGAAAGCA AGCTGCAGGA CCACATAGAG CAGTTCAGAA CCCAAAAGGA AGTGACCAAG AGCGAGATGG CCGCGGCGCA GGCGGAAGTC AAGGTCAGCG AGTCGCTCAC GGGCATTGGC AACGGCATGA ACGACGCCGG CGACGCCATG CGCCGCGCCC AGGATCGCAC CCGGCAAATG GAGGCCAAGG CAGTGGCCAT GGATGGCCTG ATGGCGTCCG GCGCGTTGAG TGACCCCTTG GATAGCCGCA GCCAGACCGA AAAAGAACTG GACGAGGTGC GCGCTACGAG TGGTGTGGAT GACGACCTTG CTCGGCTCAA GGCGGAAATG GCGAAGGAGA AAGGCACACC GGGAAGCGGC GCTGACGGCG CTTGA
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Protein sequence | MSIFKHAAEI LESKVNHFLD NAEDPAETLD LSYEKMIANL QDTKRHLADV VTERISLENQ MAQAQKAADK ADADARVALG ANREDLARAE LAQKQSELQK IASLKEAHDT VAAQAQKLTD YESKLQDHIE QFRTQKEVTK SEMAAAQAEV KVSESLTGIG NGMNDAGDAM RRAQDRTRQM EAKAVAMDGL MASGALSDPL DSRSQTEKEL DEVRATSGVD DDLARLKAEM AKEKGTPGSG ADGA
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