Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1993 |
Symbol | |
ID | 7135673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1750286 |
End bp | 1751191 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530366 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002426400 |
Protein GI | 218668043 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.223319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCGG AAAAACCAGA CCCGGCCCTG CTGTTGATCT GGGCGCAAGC GGCCCGCTCA GGAAATCTGC ACGCCGCCGC CGATTTGCTT TTCATGACCC AACCGGCCGT GTCCCATCGC CTCAAACAGT TGCAGGAATG GGTAGGGGAA CCTTTGTATC GACGCAATCG TCGCGGTATC GAGCCGAGTG AGACCGGGCT ATGGCTCTTG CGGATCGCAG AGCAGATCGA AGCGGCTTTG GCGGAAGCTC GGGCGTTGCG AGGGGATACC CGGGAGTTGT TGCGGGGATC TCTTGCCCTG GTGGCTAGCC ACAGCAATGC CGAGACCCTC CTGCCACGGG CCATCGCCGA TTTTCGTGCC CGCTATCCTG GGGTTGCCTT GCGCCTGGTC ACCACCAACA GTCGTCGGGC CATATCCATG CGTGACCAAG CGGATCTGAT TTTTGTGGAA GACGACGCAG CATTATCCGG CGCCACCGAC TGGACGCAGG AAACACTAGT GGAAACGGAG ATCGTGGCGC TGGTCCCCGA TCGACATCCA TGGCTGGGAC GATCCGAGCC TCTTTCCCTT TCATCCCTTG CCGAGGAAAC CCTGGTTTGG CGGGAAGAAG GTTCGGGCAT TCGTAACCAT GTGATGCAAG CTTTTCAGAA ACAGGGGATT TATCCTGAGA TCCGGTATGA ATTGAGCGGT CTTGCTGCCG TCCGCGACGC GGTGCGATGC GGGCTGGGGG TCGGTTTTGT CTCCGCACTC AACAGCGCCG GCCAACGGCC TGGCATTGCG ACACTGACTA CTACGCCCGT TATCCGCCAC AAACTTTCGG TGCTGCACCG GCGTGCGCCA AGTCATAGCG CCAAGGCGTT CCTCGCGCTA CTACAGCATA TGGTGACGAG AGAAAATGCC GGGTAA
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Protein sequence | MNSEKPDPAL LLIWAQAARS GNLHAAADLL FMTQPAVSHR LKQLQEWVGE PLYRRNRRGI EPSETGLWLL RIAEQIEAAL AEARALRGDT RELLRGSLAL VASHSNAETL LPRAIADFRA RYPGVALRLV TTNSRRAISM RDQADLIFVE DDAALSGATD WTQETLVETE IVALVPDRHP WLGRSEPLSL SSLAEETLVW REEGSGIRNH VMQAFQKQGI YPEIRYELSG LAAVRDAVRC GLGVGFVSAL NSAGQRPGIA TLTTTPVIRH KLSVLHRRAP SHSAKAFLAL LQHMVTRENA G
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