Gene AFE_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1895 
Symbol 
ID7134512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1654828 
End bp1655856 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content56% 
IMG OID643530271 
ProductISAfe1, transposase 
Protein accessionYP_002426308 
Protein GI218666198 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTTA CAACATACGG ATTGGATTTG GCAAAAAGGG TCATGCAACT GCACTGGGTA 
AACCTGGAGA CCGGCGAGAT TCACCGCAAA CAGTTGAAGC GCCGTGCACT CCTGGAGTTT
TTCGCCAACC GCCAACCGGG AATCGTGGCG ATGGAGGCTT GCGGTAGCGC CCACTATTGG
GGACGGGAAT TGCGTAAGCT GGGGCATGAG GTCCGCTTGA TTGCTGCCCA GTTTGTGCGT
CCCTTCGTGA AGACCAACAA GAACGATGCG GCCGATGCGG CAGCGATCTG GGAAGCCGTA
CAGCGGCCTG ATATGCGCTT CGTGGCGGTC AAGAGTGAGG AACAGCAATC CGTTCTGTCG
CTGCACCGTA TGCGGGAGCA ATTGATCAAG ATGCGCACTA TGCAGGTGAA CCAGATCCGG
GGCCTGCTCT ACGAATTTGG TGCTGATCTG CCGCAGGGCC GCCAGCGGGG GCTGAAAGAG
GTTCCTGATG CTTTGGCCGA CCTGGAAAAA TCGATATCGC CCATGCTGCG GGACACGGTT
CGTCAGCAAT TAAAACGTCT TGAAGAGATG GACAAGGATA TTGCGGATAT CGAAAAGCGT
TTGACGCTGT GGAAGAAAGG CCAAGAGGCC GTGACTCGAT TGATGGCTAT CCCCGGCGTG
GGGCTACTTA CGGCAACTGC CATTATCGCC ACCGTGGGAG ATATGAAGTC CTTTCGTTCA
GGACGGGAGT TTGCGGCGTT TCTGGGGCTG GTTCCCCGCC AGAGTGGGAC CGGTGGCAAG
GTCCGATTAC TGGGGATCAG CAAACGGGGG GATACCTATC TCCGAACATT GCTGACCCAT
GGAGCCAGGG CGGTGGTGAA CTTCCAGATC AAGAATCGGA ATCCCTGGAT TGACAAACTG
CTCAGTCGGC GACCCCATAA TGTGGTGGTC GTGGCACAGT CCAACAAGAT GGCGCGAACC
ATCTGGGCGC TGCTGGTGAA AAACACAGAA TATGTGGCCA ATCACGCTAG GAATGCGGCC
GCCCTATAG
 
Protein sequence
MQVTTYGLDL AKRVMQLHWV NLETGEIHRK QLKRRALLEF FANRQPGIVA MEACGSAHYW 
GRELRKLGHE VRLIAAQFVR PFVKTNKNDA ADAAAIWEAV QRPDMRFVAV KSEEQQSVLS
LHRMREQLIK MRTMQVNQIR GLLYEFGADL PQGRQRGLKE VPDALADLEK SISPMLRDTV
RQQLKRLEEM DKDIADIEKR LTLWKKGQEA VTRLMAIPGV GLLTATAIIA TVGDMKSFRS
GREFAAFLGL VPRQSGTGGK VRLLGISKRG DTYLRTLLTH GARAVVNFQI KNRNPWIDKL
LSRRPHNVVV VAQSNKMART IWALLVKNTE YVANHARNAA AL