| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1856 |
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| Symbol | |
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| ID | 7136781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 1611053 |
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| End bp | 1612561 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643530233 |
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| Product | dehydrogenase, homolog |
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| Protein accession | YP_002426271 |
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| Protein GI | 218667376 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.584342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATCA TCGGCAGCGG CGCCGGCGGC GGCACCCTGG CCCGCGCCCT CGCCCCATCA
GGACTGTCCA TCCTCATCCT CGAACGCGGC GACTACCTCC CCCGCGAATG GGGCAACTGG
GACCCACACA CCGTCTTTGC CGAACACCGC TACCATACCC CTGAACAGTG GCACGATGGC
GACGGCCAGA TTTTCACCCC CGTTACCGGC TATCATGTGG GGGGCAACAC CAAGTTCTAC
GGGGCGGCCG TTTTGCGCCG GCGCGAAAAA GATTTCCTTC CCCGTCACCA TCGCGACGGC
CTCACCCCCG CCTGGCCCAT CGCCTACGCC GATCTCGCGC CCCACTATGA CCAGGCCGAG
GCCTGGTACT TCACCCACGG TCAGGCCGGT GCCGATCCCC TGGAACCGCC CCGCGGTCCC
TTCGCCTTCC CCCCTTTCCC CCACGAGCCC CTCCTCGCAG CCCTGGAGCA AAAATTGCGG
AATATGGGGT TGCACCCCTT TCCCCTCCCC CTCGCCCTCC ACCGCAACGA GGAAGACCCC
GCCCATAGCC CTTGCGTGCG TTGTCCCACC TGTGACGGCT TCCCCTGCCT GCTGCACGCC
AAGGGCGATG CCGAAGTCTG CGGTGTCACC CCCGCCCTGG CCCACGCCAA CGTCCGCCTG
CTCACCCGGC ATCGCGTCCT GCGCCTGCTG CCTGGCGGCG ACGGCAGGGG TGTGGAAGGT
GTGGAAACCG ATCAGGGCAC CCTGCGCGCC CGCGTCGTCG TCCTTGCCGC CGGCGCCGTA
AACTCCGCCG CCCTCCTCCT CGCCTCCGCC GATGCCGCCG CGCCCCAAGG TCTCGCCAAC
AGCAGCGATC AGGTCGGGCG CAACTACATG TGCCATCTCA ATAGCGCCTG CATGGCCCTC
AAAGCCGCCC AGGAAAACAC CACCGTCTTC CAGAAAACCC TGGCCATCAA CGATTTTTAC
GACGACTCGG GCGACCCCGA TTATCCCTAT CCCCTCGGCC ACATCCAGAA TCTCGGCAAG
GTCACGCCGG CGCTGCTCCA TGCCCAACAG CCCCTGCTCC CCATTCCCCT CGTCGCCTGG
ACCGCCAGCC ACTCCGTGGA CTGGTGGCTC ACCACCGAAG ACCTGCCCGA CGCCGGCAAC
CGGGTCACCC TCGACAGCGA CGGCCATATC CGCCTCGCGT GGCAACCCAA AAACCGCGAA
AGCCACCAGC GCCTCTGTGA CCAATGGCGC AAGATTCTCC ACCAGGCCGG CTTTCCCATG
GTCTTCTTTC AGGCCATGGA CATCTCCGCC ACTGCCCATC AGGTGGGCAC CTGCCGTTTT
GGCGAAGACC CTGCGGACAG TGTCCTGGAT CCCTGGTGCA GGGCCCATGA CCTCGCCAAC
CTCTATGTCG TGGACGCCTC CTTCATGCCC TCCATCAGCG CGGTCAACCC CTCCCTCACC
ATCATGGCCA ATGCCATCCG CGTCGCCGCG CATCTGGCCG AACGCTTCAA AACAGGGGCC
TGGGCGTGA
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| Protein sequence | MIIIGSGAGG GTLARALAPS GLSILILERG DYLPREWGNW DPHTVFAEHR YHTPEQWHDG
DGQIFTPVTG YHVGGNTKFY GAAVLRRREK DFLPRHHRDG LTPAWPIAYA DLAPHYDQAE
AWYFTHGQAG ADPLEPPRGP FAFPPFPHEP LLAALEQKLR NMGLHPFPLP LALHRNEEDP
AHSPCVRCPT CDGFPCLLHA KGDAEVCGVT PALAHANVRL LTRHRVLRLL PGGDGRGVEG
VETDQGTLRA RVVVLAAGAV NSAALLLASA DAAAPQGLAN SSDQVGRNYM CHLNSACMAL
KAAQENTTVF QKTLAINDFY DDSGDPDYPY PLGHIQNLGK VTPALLHAQQ PLLPIPLVAW
TASHSVDWWL TTEDLPDAGN RVTLDSDGHI RLAWQPKNRE SHQRLCDQWR KILHQAGFPM
VFFQAMDISA TAHQVGTCRF GEDPADSVLD PWCRAHDLAN LYVVDASFMP SISAVNPSLT
IMANAIRVAA HLAERFKTGA WA
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