Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1818 |
Symbol | |
ID | 7134625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1583510 |
End bp | 1584334 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643530197 |
Product | rare lipoprotein A, putative |
Protein accession | YP_002426236 |
Protein GI | 218667599 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.207585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTTA GTGGCGCACG CGCTACCGTC TATACCGTGC TGGGACTGTG GATGCTGGCA CTGAGCGGCT GTGCAGGAGT CTCGACATCA CCCACTGCCA ACAGTACGGC GCCGTCCGCC TCTGCGGCCT GCGCCACCCC CGCCCCTGAT CTGCACGCCG CCTATAACCG TCCTTATCAG GTTCACGGCC GTATCTATGC GCCGCTGAAC AGCTCCGCCG GGTACGCCGT GCGCGGCATG GCCTCCTGGT ATGGCTGGGA GTCCGGCTCC ACCACCGCCA TGGGCACCCC TTTCCGGCCA CGCGCCTTCA GTGCCGCCAG CCGGGATCTG CCACTGCCGA CCTGCGCCCG GGTCACCAAC CTCAGCAACG GCCGAAGTGT TATCGTGCTG GTCAATGATC GCGGGCCCTT TGTGGATGGC CGCGCGATGG ACCTCTCCTA CGGAGCGGCC AACGCCCTGG GGATGGCGGG GCAAGGCGTC GCCCCGGTGG AGATCGTGGC TCTGGCACCG GTAGCCGCGC CTCCGGCGGG TACATCCAGG GGCACGGTTA CGGCGGCAGC ATTGCCCATG GCCCCGGAAA TACCGGCGCC GTCCCAAACC TTTCTGCAAA CCGGGGCGTT CAGCCGGGTC AACAACGCCA CCCGTGAACG CAACCGTCTG CTCCATGCCG GCATTCGCGG CGTGCTCATC GTGCCCGGAC TGGTGAACGG GCAGCAATAC TACAAGGTAC AGATTGGCCC GCTGCCGGGT GGCGTCGCTG CGGTCCAGGT CATCGCCGAA CTCAGGCAGA TGGGCTTTCA TGATTTTTAC AGCGTAGAAC AGTAA
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Protein sequence | MAVSGARATV YTVLGLWMLA LSGCAGVSTS PTANSTAPSA SAACATPAPD LHAAYNRPYQ VHGRIYAPLN SSAGYAVRGM ASWYGWESGS TTAMGTPFRP RAFSAASRDL PLPTCARVTN LSNGRSVIVL VNDRGPFVDG RAMDLSYGAA NALGMAGQGV APVEIVALAP VAAPPAGTSR GTVTAAALPM APEIPAPSQT FLQTGAFSRV NNATRERNRL LHAGIRGVLI VPGLVNGQQY YKVQIGPLPG GVAAVQVIAE LRQMGFHDFY SVEQ
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