Gene AFE_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1812 
Symbol 
ID7134233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp1576078 
End bp1577070 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content62% 
IMG OID643530191 
Productdehydrogenase complex, E1 component, beta subunit, putative 
Protein accessionYP_002426230 
Protein GI218666711 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0733461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA TGTTTTACTG GCAGGCGTTG AACCGCGCCA TGGATGCCGA AATGGCTGCC 
GATGAGACGG TGCTGACCCT GGGCGAGGAC GTGGGCCTCT ACGGGGGCAC CTACCGGGTG 
ACCGAGGGCC TCATGGCCAA ATACGGCGAA TGGCGGGTGC GTGACACCCC CATTTCCGAG 
AACAGCTTTA CCGGCCTCGG GGTGGGGGTG GCGATGCTGG GCTTGCGCCC GGTGGTGGAG 
ATCATGACCA TCAACTTCGC CCTCTTCGCC ATGGACGCCA TCGTCAACAT GGCGGCAAAG 
ATCCCTTTCA TGTCCGGCGG CCAGTTTCCC ATGCCGCTGA CCATCCGCAT GCCCGGTGGT 
GTCGCCAAAC AGTTAGGTGC CCAGCATTCG CAAAGACTGG AGCATATGCT GATGAACGTG 
CCCGGCCTGC GCATGGTGGT TCCCGCTACT CCGCAGGATG CCTACTGGCA GTTGCGCCAA 
GCCATCCGCA GCGATGATCC CGTGATAGTT CTCGAGCATG AGTTGCTCTA TTTCGGCAAG 
GGAAAAGTGG ACGAAATGGT ACCGGCTCCG CCCATCCATC AGGCGATGGT ACGGCGACGG 
GGGCGGGATA TCACCTGCGT CGCCTACTCG CGGATGCTGC CCCTCGCCCT GCAGGCGGCT 
GAAACGCTCG CCGCGGAAGA CATCGAACTC ACGGTGATCG ACCTGCGCAG CCTTTCACCC 
ATCGATTGGG ATACCTGCAT CGCGGCAGTG GAGCAAAACC ACCGCTGCCT GATCGTCGAG 
GAGGACTGCC GCTTTGCCGG AGCCGGGGCG GAGTTCGCCG CCACCCTGCA GGAGCACTGT 
TTTTATCTGC TGGATGCCCC CATCCAGCGG GTGGCGGGGA TGGACATCCC CACCCCCTTC 
AATGGCACAC TGGAGGCCGC CAGTATCCCG CGGGCAGACG ACATAGTACA GGCAGCCCGG 
CAAATGATGG CACGAAATGG AGCAGCACGA TGA
 
Protein sequence
MSEMFYWQAL NRAMDAEMAA DETVLTLGED VGLYGGTYRV TEGLMAKYGE WRVRDTPISE 
NSFTGLGVGV AMLGLRPVVE IMTINFALFA MDAIVNMAAK IPFMSGGQFP MPLTIRMPGG 
VAKQLGAQHS QRLEHMLMNV PGLRMVVPAT PQDAYWQLRQ AIRSDDPVIV LEHELLYFGK 
GKVDEMVPAP PIHQAMVRRR GRDITCVAYS RMLPLALQAA ETLAAEDIEL TVIDLRSLSP 
IDWDTCIAAV EQNHRCLIVE EDCRFAGAGA EFAATLQEHC FYLLDAPIQR VAGMDIPTPF 
NGTLEAASIP RADDIVQAAR QMMARNGAAR