| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1752 |
|---|
| Symbol | |
|---|
| ID | 7135691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1515103 |
|---|
| End bp | 1516281 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643530132 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002426171 |
|---|
| Protein GI | 218668028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGC CTCGGCGTAG ACTGGTGTCT TCCCTCTTTC CCTGTTCCCT ACCACAGGAT
ATCGGCATGC CCCCCTTACG ACTTCCTGCA CGGCTGATGA TGCAACCGGA ACGGACTGAC
GCCCCTCTGT CGTCGGAACA AAAGACTTTT CACCGGCTCA GCCAGCAGAT TGCCAAAGTC
CGGCAACAGA TGAGCGATTG GGAGTCCGCT ATGGAGGTGA CGCGACAGCG TGTGCTCAAG
GACCTGCTGC CGTTGCGGGA TCAGCATCTG CAATTGCGTA TTCAGCTGCT GGTTCAGCTG
GACAGCATCA GCCTGACCCA GAAACTCGGG AAAGCGGATA GCGAGACTCT ATCCCAGATG
ATCGCCCAAT TGGCCGAGAA CCTCATGACG GAATCTTCCG ATCCACAGTT GCAGGAAATA
TATGATCGGC ATGGCGGCCC TGATGCAGAA GAACAGGCCA TGTTCGCCGA GATGAAAGCG
TCCATGGAGG ATTTTTTCAA CCTCAACCCC GAAGCTGCTG GGGCGGGTGC GGAAAATGGA
CCTTCAGAAA ACCCAGAAGC ATGGACGGAA AGGGAAAGGC GCCAAACGCA GGCACAGCGG
GAACGTCAAC GTGCCCGACC CAAAACGGCC CGACAAAAGG CGGAAGAAGC GCGTCAGGCA
GAACAGGCAG GGCAGATCCG CGAGTCCTTG CAGAGCATCT ATCGGCGCTT GGTCAGTGCC
GTGCATCCCG ACCGGGAAGC GGATCCGATC CTACGTGCTC AGAAAACGGC GCTGATGCAG
CGGATCAATC AGGCCTATGG GGAAAATGAT CTCCTGCAAC TGCTGGCTCT CCAGCACGAG
TTGGGCCTGA TGGATGCGCA AGCCATTCAT CATCTAGGCG ATGCGCATTT GAAAAAGTAT
AACCAAGCCC TCAAGGAACA ACTCGCGACC TTAAAAGGTA AAATGCAGGC ACTTCAGCAG
CATCTGGCCG GCAATCTCGG GGTACCCCCT TTTGCGATAC ACTCACCGCA GGCCCTGTCG
CGGGATCTTC AGGAAACCAT CCAGGCAACC CGACAGGCCA TGAGCGGGTT ACGACTGGAG
ATGAAACGAC TTGCGCAACC CGTCTACCTC AAACGCTGGA TAAAGACGGC TCGACGCGAA
ATGGCCTTGC AACATTGCAT AGAGGATGAT TTTTTCTGA
|
|---|
| Protein sequence | MKEPRRRLVS SLFPCSLPQD IGMPPLRLPA RLMMQPERTD APLSSEQKTF HRLSQQIAKV
RQQMSDWESA MEVTRQRVLK DLLPLRDQHL QLRIQLLVQL DSISLTQKLG KADSETLSQM
IAQLAENLMT ESSDPQLQEI YDRHGGPDAE EQAMFAEMKA SMEDFFNLNP EAAGAGAENG
PSENPEAWTE RERRQTQAQR ERQRARPKTA RQKAEEARQA EQAGQIRESL QSIYRRLVSA
VHPDREADPI LRAQKTALMQ RINQAYGEND LLQLLALQHE LGLMDAQAIH HLGDAHLKKY
NQALKEQLAT LKGKMQALQQ HLAGNLGVPP FAIHSPQALS RDLQETIQAT RQAMSGLRLE
MKRLAQPVYL KRWIKTARRE MALQHCIEDD FF
|
|---|
| |