| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1204 |
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| Symbol | tnsD-1 |
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| ID | 7136505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1043812 |
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| End bp | 1045641 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643529601 |
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| Product | Tn5468, transposition protein D |
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| Protein accession | YP_002425641 |
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| Protein GI | 218667038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGGCCT ATTTCCCGGA AATTTATCCC GAAGAACTGT TATACAGCGC GCTTGCGCGT
TATCATCGCC ACGTTTGTTC CAGAAGCCCG AAACACACCC TGTATGATCT CTTTGGTGAA
ACCGGGGTGC GGGCGACGGT GGGCTTGCAA AGTCATGTGG CGGCGTTGAG CCAAAGAATA
CCGGCCGATC GCGGACTCAG TCCGGAAAGG CTGACCAAGG ATTTTACCCT CTACCGTTAT
TACACGGCAT TCGAGCCGAA GTCAGTGGGA CAATTCGCAC TGGCGTCATT AGTGGACGGC
CCGGCGGATG CCGTGCATGT GCGTCTGGGT ATTGCGGCGA GCGCGATTTC GGCTCCGGCA
TACTTACGGT ATTGTCCCAT CTGCTTTGGC GAGATGTTGA GCCGCTATGG AGAAGGATAT
TGGAGGCGCA GCCATCAACT CCCCGGCGTT CTGGTTTGTC CGGATCATGG CGAGGCCCTG
GCGGACAGTG CGGTCTCTCA AGGTGCCAGT AACCAGCACG AATTCATCGC CGCGGATCAA
AAGAACTGTT CGCCTGTGGC GGCACTCCCT TCTTGGGCGA GTAGCCCGCG CCAAGTGACG
CTGTTGCAAG AGATTGCCAA GCGGAGCGCG GCGTTGCTCG ATCATCCGCC AGTGCGCTCC
CGCTTTTGTG ATTGGGGTGC GTATTATCGG AGCGCAGTGA TTGATCGCGG CTTCGGCAAA
GGCAAGGAGA ATGTCGCTCA GAACCTTCTC AGGGAAGCAT TTTTAAGCCT GTTTGAACCA
GTAATCGACC TTATCCCCGG TGGTCTCGGC GGCGATTGGC CTATGGCCAT GGTACGGAAA
CACAGAAAGG CATTTCATCC GTTGCGGCAT GTTCTATTCC AGATTTTTCT GGACAAACGG
TCGCCGCAAC GGCGGCCGGC AACCCCCTTC GGCAAGGGAC CGTGGCCCTG CTTCAATCAT
CTGGCAGACC ACTATGGGCA AGACGTGATC CACGAGATCG CTGTTCGCCA TGAACAGAAT
CGGGTGATTG GTCGATTTTC CTGCGCCTGC GGCTTTGTGT ACAGTCGAGA GGTGGGATCA
AGGAGTTCGC CGCGCATTTT GGACTTTGGC CCCCTACTGG ATGATCAAAT CCGGCAGAAA
GTGGCGGAAG GCCTGGGACT CAGGGCGGTA GCCAGATATC TTGCCATTGA TCCGGGGACG
GTGAGGTTGC ACGCCTCCCG ACGCGGGTTG AATGTGCCCT GGAAGCCCTT AGCCGCACGA
CATTCCCGAA CATTGGTGCC AGACCGGGAT GCCATAAGAA CACGGTGGTT GGACATGCGG
CAGAATCACG CTGATTTATC ACGTCGGCGA CTGGCACTCC TGCTACCCAA AGAACACGCA
TGGTTGTACT GCCATGACAG GGAGTGGCTG GAGCAACACT CACCGATGGC ACTGCACAAG
AAATGGCCTG ATCAGCGTGT GGACTGGGAG ACATTGGATC GTAGCATGGC GGCCCAACTT
CGTAAGGCTG CGCGGGAAAT CACTCGGGAG GTTCCGCCGC AACGCGTTAC TCAGGCTGCT
TTGGAGCGCA AGTTGGGGCG GCCACTCCGG ATGTCAGAAC GACAGGTAAA ACTGCCTAAA
AGTATCGGCG TGCTTGGCGA GGTCATGGAA ACTACCGATG CGTTTCGGTT GCGTCGCATT
GTCTGGGCTA CTGCAGAATT GCATCGCCAG GCGTTGCCTG TGCGATCGTG GCGGGTACGC
CGCTTAGCAG GGCTGCCTTC GATAGCTTCA CCGAGCGTAG AAACCGCCTT GGCCGCATTG
GAAATAATGG CTGGATCCTC TGAGGTATAA
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| Protein sequence | MLAYFPEIYP EELLYSALAR YHRHVCSRSP KHTLYDLFGE TGVRATVGLQ SHVAALSQRI
PADRGLSPER LTKDFTLYRY YTAFEPKSVG QFALASLVDG PADAVHVRLG IAASAISAPA
YLRYCPICFG EMLSRYGEGY WRRSHQLPGV LVCPDHGEAL ADSAVSQGAS NQHEFIAADQ
KNCSPVAALP SWASSPRQVT LLQEIAKRSA ALLDHPPVRS RFCDWGAYYR SAVIDRGFGK
GKENVAQNLL REAFLSLFEP VIDLIPGGLG GDWPMAMVRK HRKAFHPLRH VLFQIFLDKR
SPQRRPATPF GKGPWPCFNH LADHYGQDVI HEIAVRHEQN RVIGRFSCAC GFVYSREVGS
RSSPRILDFG PLLDDQIRQK VAEGLGLRAV ARYLAIDPGT VRLHASRRGL NVPWKPLAAR
HSRTLVPDRD AIRTRWLDMR QNHADLSRRR LALLLPKEHA WLYCHDREWL EQHSPMALHK
KWPDQRVDWE TLDRSMAAQL RKAAREITRE VPPQRVTQAA LERKLGRPLR MSERQVKLPK
SIGVLGEVME TTDAFRLRRI VWATAELHRQ ALPVRSWRVR RLAGLPSIAS PSVETALAAL
EIMAGSSEV
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