| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1095 |
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| Symbol | |
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| ID | 7135559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 985906 |
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| End bp | 987174 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643529492 |
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| Product | pilus assembly protein TraW, putative |
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| Protein accession | YP_002425567 |
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| Protein GI | 218666572 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.521873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTA CTCCGGTTGT CGATCAGCAG CAAGTCACCG CCATCGTCCA GCGATCCGAC
AGCATCATGC AGAATGCTGG AAAGCAGACT GCCCCGGCCT GGTTGCGGGT GCCCAAAAAG
GCTGCCGCAG AAACGGAGAT GGCCGTGCCC AAATCCGACG TGCAGGCGAA CAACATCCTC
CAGCGCTACG CCCAACAGTA CGCGCCACAA TCCGCCAGCG CCGCTCAACA ATGGTTGCGC
ACGCGGGTCA ATGGGGTGCC GGTGGTACCG CCAAATCTGC ATGGCAAGGC GCTCCAGGAA
TACGTGGACC ACACGCTGAT GGCGAAAGAA GAGAATGCCG CCAAAACGCT GGTGTTCATT
TCCATGGACA TGCCCAAGGC GATTTTGCGC AAGTGGTTCG CGGAAGTGGC GGACAACCGG
CATCTATTCG AGACCACGGT GTTCGTGTTG CGCGGTTGGC CGGATAATCC TGAAGGGTTG
CCGGAAACAG TCAGCAAGAT CAACCGGCTG ATGCCATCCG CAAAAAAAGC GGCGAATGTC
GAGATCAATC CCATACTCTT TACCGACCAC AAGGTCAACA TCGTGCCGGT GATCATCCAT
CAGCCGGGCA ATGGCGCCTG GAGCGTCATC GTCGGCGATG GCGACGGCTT GCAGGGGGCG
ATCCGGGCGA TCAACCAAGG GAAAGACAGC CCTACTAAAA TCCATGGGCA TACTTGGAAA
GTGGCCGAGC CCAACATGAT TTCCATCTTC GAACAGAAGA TCAAGACATT CAACTGGAAA
AAGACGGTGG AGCAGGCGAA GGAGAGAGGT TGGGAGAATA TGTCCACCCG GCTGGGCGAC
GCCTTGCCGG ATTCCCTCCA CGGCAAAAGC TACACCTATA ATCCCAGCAT TATCGCGACC
GCCACCATTC GCATGCCGAA CGGCAAGGTG CTGGTGCGCA AAGGGCAGGA GATCAACCCT
CTGACGGCGT TCCCGTTCCC GTGGACCCAG AGCTACATCG TGTTCAATCC GGCCCAGGCC
TGGCAGGTGG CTCAGGTGCA GGCCTGGGAG AGCACGGTTC CCAACGTGGT CATCATGGCC
AGCGAGCTAC CGAAGACCTT GCAGGGCGAA GACCGGCTGG TGACTGCGCT GCAGCATCCG
GTGTACGGCT TCTATCCGCA TCTGGCGCAC CGGCTCGGCA TCAACCGGGT GCCGGCGCTG
ATCCAGCCGG ATCACGATGT GTTGTCCATT ACGGTTCCGA AAGAGCCGCT ACCGGGAGCA
AAACGGTAA
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| Protein sequence | MIPTPVVDQQ QVTAIVQRSD SIMQNAGKQT APAWLRVPKK AAAETEMAVP KSDVQANNIL
QRYAQQYAPQ SASAAQQWLR TRVNGVPVVP PNLHGKALQE YVDHTLMAKE ENAAKTLVFI
SMDMPKAILR KWFAEVADNR HLFETTVFVL RGWPDNPEGL PETVSKINRL MPSAKKAANV
EINPILFTDH KVNIVPVIIH QPGNGAWSVI VGDGDGLQGA IRAINQGKDS PTKIHGHTWK
VAEPNMISIF EQKIKTFNWK KTVEQAKERG WENMSTRLGD ALPDSLHGKS YTYNPSIIAT
ATIRMPNGKV LVRKGQEINP LTAFPFPWTQ SYIVFNPAQA WQVAQVQAWE STVPNVVIMA
SELPKTLQGE DRLVTALQHP VYGFYPHLAH RLGINRVPAL IQPDHDVLSI TVPKEPLPGA
KR
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