Gene AFE_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1029 
Symbol 
ID7134878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp929744 
End bp930427 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID643529427 
Producthypothetical protein 
Protein accessionYP_002425502 
Protein GI218666631 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGTG CGCAACTGCT GTGGCTGCTT TTGGGCTTGC CGAGCCTCGC TGCGGCGCAG 
GTGCTGACAC CAGCGCCAAA TCCGGCCAGC GTCAATTTCC ATGTGGTGAC GCATTACCGG 
GTGCCCAGAA CGGTGTTGCA TGCCGATCTA CAGGCAGAGG CGTCGGGGAA AAACCCGGCG 
AAGCTGGCCG CCATGGTCAA TCAGGACGTG GCCTGGGCAA AAGCCCTGCT ACAATCGGTG 
CCTGGGATTA CCTGGCGTAG TGCCGGGTAC CAGACCCAGG CGACGGGCCA AACCGGTGCG 
CCCTGGCTGG TACGGGAAGA TCTGGCCGTG CAAAGTCCGG ATCCGGCCGC GTTGCTCCCC 
TTGCTGGGCA CGTTGCAATC CCGGTTGCGC CTGGTCGGGA TGCATTATGC AGCGTGTCCT 
GCCGCCGCAC ACAAGGCACG GAGAGCGGCT GAGCTGCGGG GGCTGCGCCG GTACCGGAAA 
GAAGCACAGC AGAATTGCGC GGCGATGGGC TACAAGGGGG CGCGTCTGGG ACAGGTCTTC 
ATCAACACGA ATGTCGTCCC ATTGGCGCGG CCTATGCCGG TCATGGCGCT GTCCGCCCGG 
GCCGTTCCCG GGCCGGTAGT CGGCCGGGGC GGGACGGAAA GTGGCAGGGT GGTGGTTGGG 
GGCAATGCTT ACTGTGAGAG GTGA
 
Protein sequence
MRRAQLLWLL LGLPSLAAAQ VLTPAPNPAS VNFHVVTHYR VPRTVLHADL QAEASGKNPA 
KLAAMVNQDV AWAKALLQSV PGITWRSAGY QTQATGQTGA PWLVREDLAV QSPDPAALLP 
LLGTLQSRLR LVGMHYAACP AAAHKARRAA ELRGLRRYRK EAQQNCAAMG YKGARLGQVF 
INTNVVPLAR PMPVMALSAR AVPGPVVGRG GTESGRVVVG GNAYCER