Gene AFE_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1028 
Symbol 
ID7137168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp928854 
End bp929747 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content60% 
IMG OID643529426 
Producthypothetical protein 
Protein accessionYP_002425501 
Protein GI218667014 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTCA CAGAACCCTA TGCCGGTCCC ACACCCATCG TTCAGGTGAT CGCCAGCGCC 
CGGCGCGAGG TCAGCCTGAA TGTGTACTAT CTGTCCAGTC GGCCTATTCT GAATGCTTTG
CGGGCCGCGC ATGCGCGAGG TGTGGCGGTG CGGGTGATTC TGGACGAGCA TCCCTATGGC
ATGAAGCCCT GGATGATCCA GAAGGAGGTT CGCGCCGTGC AGGCCACAGG CGCTGCATTG
CAGTGGGCGC CGCCACGCTT TGAGGCGGCC CCGGGCCGGT ACGTCTTCGA CCATGCCAAG
TACGTGTGCG ATACCCACGA ATGCGAAATC GGCACGGCCA ACTTCGATTG GAGCGCCTTT
CATCGCAACC GGGAGTACCT GGATGTGACC AGAAACCCCA ACATCGTTCG GGCGGCCAAT
GCGGTATTCG CGGCCGACTG GACCAATCAA CGGGCCCCGG CCTGGACGCA TCGGGTGTTG
GTCCTATCTC CCGGCACGTC GGCCGGACAA ATGCTGGCGG TCATCAATCA GCCTGGAACC
GTGGAGATCG AGAGCGAGGA GATGGGCAAT GACCGGGAAA TGCTCGACGC CATTGCCGCC
AAGGGTGCGC AGGCCTGGGT GATCCTTCCG GCCAGCATCA GCGCCCAGGA CAAACGCAAC
GCGGACTTTC TGATGCGGCA CGGGGTGCAT GTACGGCTGT TGCCAAAGAA ACCGATCTAC
ATGCACGCGA AAGCCGAAAT TTCGAGCCAT TACGCCTTTG TGGGGAGCGA AAATTACAGT
GTTTCGTCGC TTCAGATGAA CCGGGAAATG GGGCTGATCC TGAACAATCC AAGAGATATT
TCCATGTTGC AGGCGCAGTT CGCGCGGGAC TGGAAGGCGA CGGGGCCGGC ATGA
 
Protein sequence
MLFTEPYAGP TPIVQVIASA RREVSLNVYY LSSRPILNAL RAAHARGVAV RVILDEHPYG 
MKPWMIQKEV RAVQATGAAL QWAPPRFEAA PGRYVFDHAK YVCDTHECEI GTANFDWSAF
HRNREYLDVT RNPNIVRAAN AVFAADWTNQ RAPAWTHRVL VLSPGTSAGQ MLAVINQPGT
VEIESEEMGN DREMLDAIAA KGAQAWVILP ASISAQDKRN ADFLMRHGVH VRLLPKKPIY
MHAKAEISSH YAFVGSENYS VSSLQMNREM GLILNNPRDI SMLQAQFARD WKATGPA