| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0960 |
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| Symbol | mdoD |
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| ID | 7136839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 877541 |
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| End bp | 879085 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643529358 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_002425434 |
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| Protein GI | 218665141 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT ATCGTCGTCG TCATCATCTG TCACTGAAGC CGCTTTCTGC CGTCCTGCTT
GGGCTGGCCG CATTGACGGC AACGCTGCCC GCATACGCCG CCGAGTTCGG CATGGCTACG
GTGGAGGCCA AGGCCAAATT GCTGGTGGAC CGCACCTACA ACCCGAAGCC CTTGCCTATC
CCGGCTTTTC TCAAAGATCT CACGCCCGAC CAGTATGCCG AGATTCAGGA TGTTTCACCG
CTCTGGAGAG GCGACCACTT GCCGTACGAG GCACAGTTTT ATCTTCCTGG CTCCTGGTTT
CACCGCCCAG TGGTTATTCG CAGCGTTGTG GACGGTGCGG TACGGCCAGT GCCCTTTACG
CTGGAGCACT TCAGTTTCGG CAAACTGAAC GTACCCAAAA ATATACCCAG CGCACTCGGC
TATGCAGGTT TCCGTCTGCT CGCGCCGCTC GACAATCCAC CGCATCACAA CGAGTTCATC
TCCTTTCTCG GTGCGACCTA TTTTCGCGCT GTCGGCAAAG GTGCCATCTA CGGGACCTCG
GCCCGTGGGC TCGGGATCGA CACGGCTCAG CCTTCCGGCG AAATCTTCCC CTACTTCAAA
GAATTCTGGC TGGTGCGCCC CAAACCCGAT GCGACCTCGA TGGTGGTCTA TGCGCTGATG
GACAGCTCCG TCGCGACGGG GGCCTATCGC TTCACCATCC AGCAGGGGGA TAGCACCACG
GTGCATGTGG AGGCCACCAT CTACCTGCGC AAGCCGGTAC AGGTACTGGA ACTGGCGCCC
TTGACCAGCA TGTACTGGCA CGGCCATGGA CGCGGCGCCA TCGCAGGTGA CTGGCACCCG
GCCCAGCACG ATTCCAGCGA CTTGGTCATG GCCAACGGTA ATGGTGAATG GACGACCAGG
CCCATCAACA ACCCGCTGTA CGCCCAGACC ACGACCTACG CGATGGATCA TCCAGTCGGG
TTTGGCCTGA TTCAGCAGGA TCGCCGGTTC TCCGCTTACC AGGGTATCGA AACCCAGTAC
CAACGGCGCC CCAGCGTCTG GGTTCAGCCC GACGGTGATT GGGGCAAGGG GCAGCTACGT
CTGGTGGAGT TGCCCACCAA CAATCGGGAT ATGGATAATA TTGTCGCGTT CTGGGTGCCG
GAACATGAAC CTGCACCCAA AACGCCCCTG CACTTCGCCT ATACCCTGCG CTTTTTCCTC
GATAATCACG GTCTGATCCC GCTGCCCCAT CCGGTGGGCA CCTATCTGGG CGACGATCCA
AAAGTGCCCG GCGCACGGAA GGTGGTAATC GATTTCGGGG GCGGGGCACT CTCCAAACTG
CAGGAAACCG CGCCCGTGCA GGTCCATCTT GAGGCTGCGG ACGGTGCGAA AATTCTCAGC
CAGAAACTGG AATGGGAAAA GGATGGTCAT TTCTGGCGAG TGATCGCCGT CATTCAGCCG
CAACCGGGTT CGCCCAGTAA TGTACGGTGT TTTTTAACCC TGAACCATCA GGTGATGAGC
AATACCTGGA CATATCTTTT ACACGCGGCA AAGGAGCAGA TGTAA
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| Protein sequence | MNIYRRRHHL SLKPLSAVLL GLAALTATLP AYAAEFGMAT VEAKAKLLVD RTYNPKPLPI
PAFLKDLTPD QYAEIQDVSP LWRGDHLPYE AQFYLPGSWF HRPVVIRSVV DGAVRPVPFT
LEHFSFGKLN VPKNIPSALG YAGFRLLAPL DNPPHHNEFI SFLGATYFRA VGKGAIYGTS
ARGLGIDTAQ PSGEIFPYFK EFWLVRPKPD ATSMVVYALM DSSVATGAYR FTIQQGDSTT
VHVEATIYLR KPVQVLELAP LTSMYWHGHG RGAIAGDWHP AQHDSSDLVM ANGNGEWTTR
PINNPLYAQT TTYAMDHPVG FGLIQQDRRF SAYQGIETQY QRRPSVWVQP DGDWGKGQLR
LVELPTNNRD MDNIVAFWVP EHEPAPKTPL HFAYTLRFFL DNHGLIPLPH PVGTYLGDDP
KVPGARKVVI DFGGGALSKL QETAPVQVHL EAADGAKILS QKLEWEKDGH FWRVIAVIQP
QPGSPSNVRC FLTLNHQVMS NTWTYLLHAA KEQM
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