Gene AFE_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0892 
Symbol 
ID7135850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp805977 
End bp807200 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content62% 
IMG OID643529292 
Producthypothetical protein 
Protein accessionYP_002425370 
Protein GI218667536 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG CTAACCCATA CCCCATTCTT CGCCTGCGTC CCAAGGAGGA TCGCCGCCTC 
CGCGCCGGTC ATCTATGGGT CTACAGCAAC GAAATCGATG TCCAGAAAAC CCCCCTCACC
GCCGTCACTC CAGGCAGCGT CTGCCGGATG GAAGACGCCC AGGGTAAGGC CCTGGGGCTC
GCCCACGTCA ATCCTCATAC CCTGCTCTGT GCGCGCTTGT TGAGCCGTGA CCCGCATGTC
CGCATCGACG AGGGCTTTTA TCGCAGCCGC TTGCAGCAGG CTTTGCGGAT GCGGGAGCGT
CTGTTCGGTG CGCCTTTCTA TCGCCTGGTG CATGGTGAAG GCGATGGTTT GCCGGGCCTG
GTTATCGACC GCTATGAGGA CCATCTGGTG CTACAGGCAG GTAGTCTCGG CATGGATCGC
GATTTGCCCC TGATCACGGC GGCTTTGCAG GGTCTGCTGC GCCCGGCGGG CATTTTGCTG
AAGGCCAGCG GCGCGGCGCG GCGACTGGAA GGGTTGGAAG ACCGCGTCGA AGTCCTTTTC
GGGCATATCC CGGAGCGGCT GGAGGTTTGG GAAAACGACT GTCTGTTCCA GGTTGACCCC
CGCGGCGGGC AAAAAACCGG CTGGTTTTAT GACCATCGCG CCAATCGACG CCGCTTGCGG
GACTTTGCCC AGGGGCGCCG GGTGTTGGAC TGTTTCGCCT ATCTTGGCGG CTTTGCCATC
CCCCTGGCCA AGGCCGGGGC AAGCGCCGTC ACCGCTGTGG ACAGTTCGGC ACCGGCCCTG
GCGATCCTCG AAGAAAACGC CCGACGCAAC GAGGTTGAGG GCTTGCACAG CATTCACGGC
GATGCCATGG AGACGCTGCA TAATTTACGC GACCGCGGTG AGCAGTTCGA TCTCATCGTC
CTGGACCCCC CGGCCCTGAT CAAATCGAAG AAGGATTTCA AGGAAGGCAG CATCGCCTAT
CGCCGTTTCA ACGACATGGC CATGCGCCTG CTGACCCCCG GCGGCATCCT GTTCTCGGCA
TCCTGCTCGC ATCACCTGAG CCGGGAAACG CTGCTCAGCC AGATCGCTTT TGCCCCCCAG
CGTGGGGACT ACCAGATCAT CGGCGAAGGC AGTCAGGATA TGGATCACCC CGTTCACCCG
GCGGTACCGG AAAGCAACTA TCTCAAGGGC TTCTTCATCC ATCGTCGAGA AGAGTTACCC
GAAGAGGCAG AGAAGACCGC CTGA
 
Protein sequence
MSSANPYPIL RLRPKEDRRL RAGHLWVYSN EIDVQKTPLT AVTPGSVCRM EDAQGKALGL 
AHVNPHTLLC ARLLSRDPHV RIDEGFYRSR LQQALRMRER LFGAPFYRLV HGEGDGLPGL
VIDRYEDHLV LQAGSLGMDR DLPLITAALQ GLLRPAGILL KASGAARRLE GLEDRVEVLF
GHIPERLEVW ENDCLFQVDP RGGQKTGWFY DHRANRRRLR DFAQGRRVLD CFAYLGGFAI
PLAKAGASAV TAVDSSAPAL AILEENARRN EVEGLHSIHG DAMETLHNLR DRGEQFDLIV
LDPPALIKSK KDFKEGSIAY RRFNDMAMRL LTPGGILFSA SCSHHLSRET LLSQIAFAPQ
RGDYQIIGEG SQDMDHPVHP AVPESNYLKG FFIHRREELP EEAEKTA