| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0720 |
|---|
| Symbol | |
|---|
| ID | 7134657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 646208 |
|---|
| End bp | 647458 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643529126 |
|---|
| Product | FAD-dependent oxidoreductase |
|---|
| Protein accession | YP_002425208 |
|---|
| Protein GI | 218665880 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC ATGGCGACGT GGTGGTTCTG GGAGCAGGCA TCGTCGGGGT TTCCATTGCC
CTGCAGCTGC AGTTACGGGG CCGTCCCACC ATTCTTCTGG ACCAGCAAGG GGCCGGGGAG
GGGACATCCT TCGGCAATGC CGGCCTGATT CAGCGCGAGG CGGTCATGCC GCACCCCTTC
CCCCGTGCCC TGGCGACGTT GCTCAGCTAT GCCCGCAATC AGTCGACCGA GGCCTACTAC
CGGGGGACGA TGCTGCCGCG TCTGGCGATT CCCTTCCTGC AGTACTGGTA TAACTCCCGT
GAAGACCGTC ACCGGACGAT CGCCCGGCAT TATGCGGCAT TGATCGCGCA CTGCCTGGAT
GACCATCTGG CTCTGGCCGG CGCGGCGGGG GCGGTCGATC TGCTCCGTCC CGGTGGCTGG
TTGCAGGTGC ATGAAAAGGC AGAATCTCTG GATCATGCCC TGAAAGAAGC GGCATATAAG
GCCGGGAATT TCGAGGTGGC TTACGACGCA CTCGACGGCG CGCAGGTGGC GGCGATGGAG
TGCAGTCTGC GCCCCGGGCT GGCCGGTGGT ATCCACTGGA CCCAGCCGCT GGCCGTTGTC
GATCCCCACG CGCTCACTCG CGCGTACCTG AACTATTTTA CCCGGATGGG CGGCGAGTTT
CGCACCAGCG CCGTGCGGAG CGTAGAGCGC AGTTCGACGG GGTGGCGCGT CGCTACGGTG
CATGAACCGG TCGACGCCAT AGAGGTGGTA GTGGCCTTGG GCGCCTGGTC GCCGGATGTG
ACCAAACCTC TGGGTTACCA CCCGCCGCTC TTTGTAAAAA GGGGCTATCA CATGCACTAC
GCCCACCCGG AGGCCACACC ACTCGGTCAC CCGGTGCTCG ATGCCGATCA GGGTTATATG
CTGGTGCCCA TGCAGCGTGG TATCCGGCTG ACGACCGGTG CGGAGTTTGC GCATCGGGAC
GCCCCGCCTT CCGCTATTCC GCTTACTCGG GCGGAGGCGC AGGCACGGCG GTTATTGCCT
GCCCTCGGCA GACGTCTGGA CGCCGACCCC TGGATGGGGG TGCGCCCCTG CACCCCCGAC
ATGCTGCCGA TCATTGGTCG GGCGCCGGGG CATCCGGGTA TGTGGTATGC CTTCGGACAT
TGTCACCAGG GTCTGACCCT GGGGCCGACC ACCGGGCGTT TGCTGGCCGA GATGATGTTG
GGTGAAACGC CGTTTACGGA TCCCGCTCCC TACCGCCCCG AGCGGTTCTG A
|
|---|
| Protein sequence | MAAHGDVVVL GAGIVGVSIA LQLQLRGRPT ILLDQQGAGE GTSFGNAGLI QREAVMPHPF
PRALATLLSY ARNQSTEAYY RGTMLPRLAI PFLQYWYNSR EDRHRTIARH YAALIAHCLD
DHLALAGAAG AVDLLRPGGW LQVHEKAESL DHALKEAAYK AGNFEVAYDA LDGAQVAAME
CSLRPGLAGG IHWTQPLAVV DPHALTRAYL NYFTRMGGEF RTSAVRSVER SSTGWRVATV
HEPVDAIEVV VALGAWSPDV TKPLGYHPPL FVKRGYHMHY AHPEATPLGH PVLDADQGYM
LVPMQRGIRL TTGAEFAHRD APPSAIPLTR AEAQARRLLP ALGRRLDADP WMGVRPCTPD
MLPIIGRAPG HPGMWYAFGH CHQGLTLGPT TGRLLAEMML GETPFTDPAP YRPERF
|
|---|
| |