Gene AFE_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0655 
Symbol 
ID7136629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand- 
Start bp587000 
End bp587674 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID643529061 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_002425144 
Protein GI218668078 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGCAC TTCTGGTTCT GGACAATCTG GCAAAACGGC TTCCCGGAGA CCCTCAGCGT 
TGGTTATTCC GCAATGCGAG CCTCCACATA GCACCAGCAG ACTTTGTGGC CGTCATGGGG 
GAAAGCGGCG TTGGCAAAAG CACCCTGCTC AATATCATTG CCGGGCTGGA TCGCCCCGAT 
GCGGGACACA TGACATTCAA GGGTGAGCCG CTCGACACCC TGGATGACGA TGCGCGTACG 
CTCCTGCGGC GGCGGCACAT GGGTTTTGTG TTTCAGGCCT TTCATCTGAT CCCACAATTG 
ACCGTAGAGG AAAACATCGC CCTGCCTTGG CGACTGAACG GCCTCTCCCG GCGCGACATG 
AATCAGCGGG TTAAAACTCT GGTGGAACGG CTCGGCATTG GCAGTCACCT GAATGCCTGG 
CCGCGGGAGC TTTCCGGCGG CGAGATGCAG CGGGTTGCGG TAGCGCGGGC GGTCGTACAT 
CGCCCGTCGC TGATTCTGGC GGACGAACCG ACGGGGAGCC TCGATGCCGA ATCTGCGGAA 
ACCGTGCTCA GCCTCCTGCG TGAGGCGGGA GAAGCCGAGG CGGCGGCTAT TGTGCTGGTG 
ACCCATTCGG CGACAGCGGC AGACTGGGCG CAACGCCGCC TGCGTTTCGA CGCGCAGGGC 
TTCCATCCCC TGTGA
 
Protein sequence
MTALLVLDNL AKRLPGDPQR WLFRNASLHI APADFVAVMG ESGVGKSTLL NIIAGLDRPD 
AGHMTFKGEP LDTLDDDART LLRRRHMGFV FQAFHLIPQL TVEENIALPW RLNGLSRRDM 
NQRVKTLVER LGIGSHLNAW PRELSGGEMQ RVAVARAVVH RPSLILADEP TGSLDAESAE 
TVLSLLREAG EAEAAAIVLV THSATAADWA QRRLRFDAQG FHPL