Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0117 |
Symbol | |
ID | 7134598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 110500 |
End bp | 111384 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643528531 |
Product | hypothetical protein |
Protein accession | YP_002424627 |
Protein GI | 218667000 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.138257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAGCG CTCAGGCTCG TGCGGGGGAT GCCAGTGCAT TACGCACCCT TGAAAAGGCA GCTAAAAGCG GGGACAAAAC CGCCGAAAAC TGGCTAGGAA TTTACTACGG TGTTCAGAAA AAATATCGCA AGGCGGTATT CTGGTCGCGC AAGGCAGCCA TTCAAGGTGA CCCGTTGGCC GAGTTTGTCA TGGGCGAGGT GTACTACTAC GGTAATGGCG TCCCGAAAAG CGACCGCACT GCATTGTATT GGTATAAATT GGCAGTAGCC CAAGGCTATC AGGGTGCGCA ACCCATGCTG ACCAAAGTAC GGCAAGAGAT TGCTGCGCAG GCGGAGTTGC GCGACCACAC TCAGGTCGTC GCTCGAACAG ATGAACAGCC ACCCGCAGGG ACAAGCAGTT CTACATCTGT GACGCCGATT TCTGACAACA AGGTTGTCAG TACCCCTGCG ATCAAGTCGA CAACACCAAT GGCAGTAACT CGTCCTTCAT CCGCCCTCCT GACAGCCAAA GAACAAAACC TTCTGGGCTA CGCCTACTAT AGTGGCCAGG GCAAACCCAA AAATTATGAA AAGGCGGTTT ATTGGTACCG CAAGGCGGCT GCCCAAGGTG ATGCGAGTGC TGAGAACAAT CTGGGTGTGG CCTATAACTA TGGTAATGGA GTGGACAAAA ATTTTTCACG CGCTGTGTAC TGGTATCGAA AAGCTGCTGA TCAGGGGAAT CCCAGTGCCC AAACGAATCT GGGAGTTGCC TATTACCAGG GCGACGGAGT GAAAAGTAGC ACCACCGAGG CTCTCCACTG GTGGACGAAA GCTGCCAAGC AGGGCGATGC GCGTGCACGT AGCTATTTGA ATGTGGTAAA ACTGACGTCA CGGGGGACTA AGTAA
|
Protein sequence | MLSAQARAGD ASALRTLEKA AKSGDKTAEN WLGIYYGVQK KYRKAVFWSR KAAIQGDPLA EFVMGEVYYY GNGVPKSDRT ALYWYKLAVA QGYQGAQPML TKVRQEIAAQ AELRDHTQVV ARTDEQPPAG TSSSTSVTPI SDNKVVSTPA IKSTTPMAVT RPSSALLTAK EQNLLGYAYY SGQGKPKNYE KAVYWYRKAA AQGDASAENN LGVAYNYGNG VDKNFSRAVY WYRKAADQGN PSAQTNLGVA YYQGDGVKSS TTEALHWWTK AAKQGDARAR SYLNVVKLTS RGTK
|
| |